Definition | Propionibacterium acnes KPA171202, complete genome. |
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Accession | NC_006085 |
Length | 2,560,265 |
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The map label for this gene is 50841817
Identifier: 50841817
GI number: 50841817
Start: 381123
End: 382196
Strand: Reverse
Name: 50841817
Synonym: PPA0331
Alternate gene names: NA
Gene position: 382196-381123 (Counterclockwise)
Preceding gene: 50841818
Following gene: 50841816
Centisome position: 14.93
GC content: 43.39
Gene sequence:
>1074_bases ATGAGCACCAGCAACCAAAGCACAACAGAATCCAAAGACGCTCAAGCAATAAAAACAGAAATATTCGATCTATACAGTGA CATCACCAAGCCAAAATCACCCCATAGAACAGGCAGGCCGGGTAAAAATGTCGCCGAACAAGCAGTAGCATTGGGGGGAG TAGCCGTAAAATACAACAAAAGTATTTTTGATGTGTGCGAGATGCTACACGAAAAGAAAATAGAACAAAGAACGATAGAG CGACAGAACTATAATCTTTTTAATAGATTTCGTCTCCAAATAGGAGACCTCTGCGATAGATTTAACTCATATTACTACAA TAGAGCCAAGACAGTAGATCAAAAGATATTCTACGATATATGCTCAACCTACAAGCAAAACGCCAGGCCAACAACAAGCG TCACCGAGCTCCGCTCATGCCTGTGCGACACCGCAGCTAGATGCAATGCCACCCCGCATGCCGTCTGGGCAGCAGCGGAA CAATACATGTCCCACAGTCTTAGAGCCGTAAGGAATAGCCTCGACTACACAAAGCCAAACTATTGGATCCGGCTTCTACT TTCAGTAATTTTTATAACCCTCATGTGCTTAGTCTGCGATCTGCCACGCGTCATAAAATCTCTATCAATTATAGAAAGCA TAGGGTTTATCATTGCCACTGCACTATTTACCGCAGACTTCGTTTTTATTTTTCTCCCAGTGACAACCCAATGGCTTAGA GTCAACAAGTTGTCAACCAAATTCCTTGAGGTTCTGTTTTCAGTATTTTCATTCCTGATAGTATATCAGTTCCAAGCTTC AAAAATGACATCAGCATCGACGCCATATCTGATGGTAGATATTTGGCTCATTGTTGCCATTTTTATTATGTGGCTTATCA CTCATAATAAGGCCAATGAAGTCGTCTCTCAGCAAGATCATATCCGCGACCTGCAAGATCAGCTTCAGACGTTGAGAATG TCGGAGCCGCAACAAATAGTAGAGCCAGACACAGTTGGACATGCCCCGAAGGAATCGTCCCGCCTCCGACTCCTGGGAAT GGTCATTAATCCATTTCAACGTCCACGTTTCTAA
Upstream 100 bases:
>100_bases GTCGGCAGCGACGGTTAACCCATCGACACGAACCCCATGGCCGACGTTCCACCATTGCAGGGCTAACTATCACATCATCT AACTTCTAGAATATCATCAC
Downstream 100 bases:
>100_bases CGGTCTCAGGAACCGACCAGCCACCCCACAGATCCAGACATTTAGACGCAAAGCTGGCTGCCAACTCGTTCCCAGGCTGG CATGCCCGCGTACAACCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSTSNQSTTESKDAQAIKTEIFDLYSDITKPKSPHRTGRPGKNVAEQAVALGGVAVKYNKSIFDVCEMLHEKKIEQRTIE RQNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDICSTYKQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAE QYMSHSLRAVRNSLDYTKPNYWIRLLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLR VNKLSTKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANEVVSQQDHIRDLQDQLQTLRM SEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF
Sequences:
>Translated_357_residues MSTSNQSTTESKDAQAIKTEIFDLYSDITKPKSPHRTGRPGKNVAEQAVALGGVAVKYNKSIFDVCEMLHEKKIEQRTIE RQNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDICSTYKQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAE QYMSHSLRAVRNSLDYTKPNYWIRLLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLR VNKLSTKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANEVVSQQDHIRDLQDQLQTLRM SEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF >Mature_356_residues STSNQSTTESKDAQAIKTEIFDLYSDITKPKSPHRTGRPGKNVAEQAVALGGVAVKYNKSIFDVCEMLHEKKIEQRTIER QNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDICSTYKQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAEQ YMSHSLRAVRNSLDYTKPNYWIRLLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLRV NKLSTKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANEVVSQQDHIRDLQDQLQTLRMS EPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41103; Mature: 40972
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSNQSTTESKDAQAIKTEIFDLYSDITKPKSPHRTGRPGKNVAEQAVALGGVAVKYNK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECC SIFDVCEMLHEKKIEQRTIERQNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSTYKQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAEQYMSHSLRAVRNSLDYTKPN HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YWIRLLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKLSTKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH VVSQQDHIRDLQDQLQTLRMSEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure STSNQSTTESKDAQAIKTEIFDLYSDITKPKSPHRTGRPGKNVAEQAVALGGVAVKYNK CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECC SIFDVCEMLHEKKIEQRTIERQNYNLFNRFRLQIGDLCDRFNSYYYNRAKTVDQKIFYDI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSTYKQNARPTTSVTELRSCLCDTAARCNATPHAVWAAAEQYMSHSLRAVRNSLDYTKPN HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YWIRLLLSVIFITLMCLVCDLPRVIKSLSIIESIGFIIATALFTADFVFIFLPVTTQWLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKLSTKFLEVLFSVFSFLIVYQFQASKMTSASTPYLMVDIWLIVAIFIMWLITHNKANE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH VVSQQDHIRDLQDQLQTLRMSEPQQIVEPDTVGHAPKESSRLRLLGMVINPFQRPRF HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA