| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841768
Identifier: 50841768
GI number: 50841768
Start: 329279
End: 330286
Strand: Reverse
Name: 50841768
Synonym: PPA0279
Alternate gene names: NA
Gene position: 330286-329279 (Counterclockwise)
Preceding gene: 50841769
Following gene: 50841765
Centisome position: 12.9
GC content: 61.31
Gene sequence:
>1008_bases ATGACTCTCGACGATGACGCCCCAATCTGGGCGAAAACCATCATTGACGGACTCAATCGTCCCTTCCCGTGGGGGTCAGC CCACCAATCCTCGGGACCAGACGATGTCGACGTCACTCCATGGCGCCTCCACCCGGCCTTCCACGGTTGCTTGGACTGGC ACTCGTCGGTCCACATGCAGTGGTCGGCGGTCACCCTGCTCCGTTGCGCGAATCAGGTGATCGACCACACAACAATCGAC GCCTTGAACGGCGTTCTCAATGACCGTCTGACCGACGAGAACGCTCGCGTGGAGGCCGAGTATCTGCGTATTCATCGCGG GTACGAGCGTCCCTACGGCTGGGGATGGGCAACCCTGCTCGCTGCCCAGTGTGCTCCCCTCACGGGCACGACGTGGGCGT CGGCCACCCGCATTATCAGCCTTCAAGTTTTCGAGAATCTGCTCGCGTGGCTGCCGACCCTCACCTTCCCGGTACGCACT GGCACCCACGACAACACCGCCTTCGGCATCGGTCTGTGTCTGGACGCTGCCCGGTCGCTGCAACGCCCTGAGGTCATCGA AGCCATTGTGGAACACTCTCATCGCTTGTTCGACGCCGACGTTCACTACCCGTCTTCGTGGGAGCCGAGTGGCAATGACT TTTTGTCGGCGGCGTTGAGCGAGGCCCACCTCATGGCTCGGGTGTATGACGTCGAGGGTCGAACCAATGAGTTCGGGACG TGGCTACACACATTCCTGCCGCGTCTGGGACAGTCTGACGATAATCTCCTGAACGTGCCCAGGGTGACAGACGGCACGGA CGGCAAGCTTGCTCACCTATATGGGCTGAGCTTGTCACGAGCCTGGCAGCTGCGCGCACTGGCCACGTGGCTTGCCGAAG GCTCCCGCCATCGTATCGAGAAAGCCACTGCCCGCCAGATCAACGAAGTCTCCCACCAAATCACCCATGGCGATTTCATG GCTACTCACTGGTTGGTGTCCTTCGCCCTGCAGGCGGTGCTGGTGTGA
Upstream 100 bases:
>100_bases ATAGCTATGGTCCGATTAAGGCGCAGATACCCACTGCAGTTCCGCTACTGGTCTGCACCATCCTCATTATGTACCTGTGC TGCTTCCCAGGAGGTTTGCT
Downstream 100 bases:
>100_bases GGAACGGGCCCGGCGCATAATGCACCGGGCCACGGCCATCGTTATCAGGGAATCAGCCCTGCTGCCCCCTGTTATTTTCC CCTGCCGAAGAGGTGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQWSAVTLLRCANQVIDHTTID ALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLLAAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRT GTHDNTAFGIGLCLDAARSLQRPEVIEAIVEHSHRLFDADVHYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIEKATARQINEVSHQITHGDFM ATHWLVSFALQAVLV
Sequences:
>Translated_335_residues MTLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQWSAVTLLRCANQVIDHTTID ALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLLAAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRT GTHDNTAFGIGLCLDAARSLQRPEVIEAIVEHSHRLFDADVHYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIEKATARQINEVSHQITHGDFM ATHWLVSFALQAVLV >Mature_334_residues TLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQWSAVTLLRCANQVIDHTTIDA LNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLLAAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRTG THDNTAFGIGLCLDAARSLQRPEVIEAIVEHSHRLFDADVHYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGTW LHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIEKATARQINEVSHQITHGDFMA THWLVSFALQAVLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37505; Mature: 37374
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQ CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCEEE WSAVTLLRCANQVIDHTTIDALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH AAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRTGTHDNTAFGIGLCLDAARSL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHC QRPEVIEAIVEHSHRLFDADVHYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHH WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIE HHHHHHHHHCCCCCCEEECCCCCCCCCCCEEHEECCCHHHHHHHHHHHHHHHCCHHHHHH KATARQINEVSHQITHGDFMATHWLVSFALQAVLV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLDDDAPIWAKTIIDGLNRPFPWGSAHQSSGPDDVDVTPWRLHPAFHGCLDWHSSVHMQ CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCEEE WSAVTLLRCANQVIDHTTIDALNGVLNDRLTDENARVEAEYLRIHRGYERPYGWGWATLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH AAQCAPLTGTTWASATRIISLQVFENLLAWLPTLTFPVRTGTHDNTAFGIGLCLDAARSL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHC QRPEVIEAIVEHSHRLFDADVHYPSSWEPSGNDFLSAALSEAHLMARVYDVEGRTNEFGT CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHH WLHTFLPRLGQSDDNLLNVPRVTDGTDGKLAHLYGLSLSRAWQLRALATWLAEGSRHRIE HHHHHHHHHCCCCCCEEECCCCCCCCCCCEEHEECCCHHHHHHHHHHHHHHHCCHHHHHH KATARQINEVSHQITHGDFMATHWLVSFALQAVLV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA