| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841745
Identifier: 50841745
GI number: 50841745
Start: 308567
End: 309613
Strand: Reverse
Name: 50841745
Synonym: PPA0255
Alternate gene names: NA
Gene position: 309613-308567 (Counterclockwise)
Preceding gene: 50841746
Following gene: 50841744
Centisome position: 12.09
GC content: 63.42
Gene sequence:
>1047_bases ATGCCGAATGCTGTTCATGACACAATGTCACCCATGTCCGAATCCCTCGTTCTGCTCGCCCCTGCAGCAAACCACGTCTA CGCCGGGCAGGCGGGACGACTGTGCGCCGCCGAGTTGTCTCTCACCTGTCCCAACGCCACGTCAGTTGCCCCGGTGACCG TGGCCGGGGTCGAGTACCTGTCGATTCACAGCGAGGATCCCCTCCCGCCAGCAGATCTGGCGGCGGTGGCGCGATCCTCG GCGGCTCTGGCCTGTTTCGAATACCGTGGCGATCTGCTGGCTCCCCTCGAGTTGCCGCAAGTTGACGTCGTAGACGAGGA CCTTGTCACCATCCCGAAGTACCGAGGCAAGACCAACGAACAGTTCACCCGTCTACTGCTCAACCTCACTCTCGCCAGTC TGGAGGGCCGCTGCGCAACCCGTCGTGATGAGGGCCAGCGGCTAGCTATCCTCGACCCGCTGGCCGGGCGCGGCACCACT CTGGAATGCGCCTGGAGGGCCGGGCATAACGGCTTCGGTGTCGAGCAGGATGCCAAGGCCGTCGAGGCGCTCGCTGCTCA CGTCACGACATGGCTGCGTCGCAAACACCTCAAGCACAGCTGCGCCACCCATCCAGTGCGACGTGACGGCCGCTCGCTTG GCAAGCGGTTTGACGCTGAGGTACGCCTGCCAAAAACCGAACCTTTGGCCATGGGCGTTTTCACTGGTGACGCCGCTGAT TCGGCAGTGCTGTGGGGACGCAAGACCTTCGATGCTGTCGTCACCGACGCCCCCTACGGTGTAGTGCATGGCTCCCACAG CGGAGCATCTCGACGTCGTTCCCCTACTGACCTGTTGCGCGAGGCCATCCCGGTATGGGCCGGTCAGCTGCGTCACGGCG GCGCGCTAGGTATGTCGTGGAACACCCTGGGTTTGTCTCGAGAACACCTCGTGACGATTCTGTCTGCCGCTGGTCTCACG CCCCTTGACGACGACCTGTGGCATCAGTTCAGCCACCGCGTCGATTCCTCGATACACCGCGACCTCATCGTCGCCGTCAA ACCGTGA
Upstream 100 bases:
>100_bases ACGAGAACCTGCACACCGCCTGATCCACTCGCACCCCGGCACCGCCCCAATTCCAGGCCGCGAGTCATGACGTCAGCATT CGACACCCGCATCACCGCGG
Downstream 100 bases:
>100_bases ACTGACCTTGACTCGTCACGAAAACAGCTGGGCCAGCACTCCGAGCTGATTCCAACGCTGGACGTCCTCCCCAGCCGCGT GACCGGCAAAGGGGTAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPNAVHDTMSPMSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYLSIHSEDPLPPADLAAVARSS AALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNEQFTRLLLNLTLASLEGRCATRRDEGQRLAILDPLAGRGTT LECAWRAGHNGFGVEQDAKAVEALAAHVTTWLRRKHLKHSCATHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAAD SAVLWGRKTFDAVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSWNTLGLSREHLVTILSAAGLT PLDDDLWHQFSHRVDSSIHRDLIVAVKP
Sequences:
>Translated_348_residues MPNAVHDTMSPMSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYLSIHSEDPLPPADLAAVARSS AALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNEQFTRLLLNLTLASLEGRCATRRDEGQRLAILDPLAGRGTT LECAWRAGHNGFGVEQDAKAVEALAAHVTTWLRRKHLKHSCATHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAAD SAVLWGRKTFDAVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSWNTLGLSREHLVTILSAAGLT PLDDDLWHQFSHRVDSSIHRDLIVAVKP >Mature_347_residues PNAVHDTMSPMSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYLSIHSEDPLPPADLAAVARSSA ALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNEQFTRLLLNLTLASLEGRCATRRDEGQRLAILDPLAGRGTTL ECAWRAGHNGFGVEQDAKAVEALAAHVTTWLRRKHLKHSCATHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAADS AVLWGRKTFDAVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSWNTLGLSREHLVTILSAAGLTP LDDDLWHQFSHRVDSSIHRDLIVAVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37505; Mature: 37374
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNAVHDTMSPMSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYL CCCCHHHHHHHHHCCEEEEECCCCCEECCCCCCEEEEEEEEECCCCCCCCEEEEECEEEE SIHSEDPLPPADLAAVARSSAALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNE EECCCCCCCHHHHHHHHHCCHHEEEEECCCCEECCCCCCCCCCCCCCHHCCCCCCCCCHH QFTRLLLNLTLASLEGRCATRRDEGQRLAILDPLAGRGTTLECAWRAGHNGFGVEQDAKA HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHH VEALAAHVTTWLRRKHLKHSCATHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAAD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCC SAVLWGRKTFDAVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSW CEEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC NTLGLSREHLVTILSAAGLTPLDDDLWHQFSHRVDSSIHRDLIVAVKP CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure PNAVHDTMSPMSESLVLLAPAANHVYAGQAGRLCAAELSLTCPNATSVAPVTVAGVEYL CCCHHHHHHHHHCCEEEEECCCCCEECCCCCCEEEEEEEEECCCCCCCCEEEEECEEEE SIHSEDPLPPADLAAVARSSAALACFEYRGDLLAPLELPQVDVVDEDLVTIPKYRGKTNE EECCCCCCCHHHHHHHHHCCHHEEEEECCCCEECCCCCCCCCCCCCCHHCCCCCCCCCHH QFTRLLLNLTLASLEGRCATRRDEGQRLAILDPLAGRGTTLECAWRAGHNGFGVEQDAKA HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHH VEALAAHVTTWLRRKHLKHSCATHPVRRDGRSLGKRFDAEVRLPKTEPLAMGVFTGDAAD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCC SAVLWGRKTFDAVVTDAPYGVVHGSHSGASRRRSPTDLLREAIPVWAGQLRHGGALGMSW CEEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC NTLGLSREHLVTILSAAGLTPLDDDLWHQFSHRVDSSIHRDLIVAVKP CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA