| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841741
Identifier: 50841741
GI number: 50841741
Start: 302241
End: 303917
Strand: Reverse
Name: 50841741
Synonym: PPA0249
Alternate gene names: NA
Gene position: 303917-302241 (Counterclockwise)
Preceding gene: 50841744
Following gene: 50841730
Centisome position: 11.87
GC content: 64.04
Gene sequence:
>1677_bases ATGGACAATGCACACACCACCCACCAGATGGGATCAGAGGTCGACGAGGTTGCCGACCACTATTGGGCCGCCCTCGTCCA GTCCAGCCCTACGCTCGCCACGGCGCTCGGTTTGGATCTTAACCAGGACGAATACGACGACCTGTCCCCCGCCGGCCTGG ACGCCCAATACCGCCTCGCCATGGACACCCTCGACCGGCTCGATCAAGCTATGCCCGCCGACGATACCGACCGGATCACG GTCGCCGCGATGCGTTCTAGCCTGGGTTTAGAGGCGGAAAGTCACGATAAGGGGTACGACCTCCTTTCTCTCAATGGCAT CGCGTCGGGAGTCCACGAAATCCGCGAGGTCTACGACGCCATGCCCACCGAGACCCCCGACCAGGTGTCGACGATCGCGC GTCGTCTTCATGCCACCGGCCCTGCCCTGGACGGCTGGCTGGCAACCCAACGCGCCTCGATCGACGCCGGAATCCCGGCG GCCATTCGCCAAGTCGACCTCCTCGTCGAACAGATCACCGCATGGACCTCCGACGGCGGGTTCTTCGACGACTACCTCAA GCGAACCGCCTCCCGTGACCTACCCGACGCTGTGACAACCGCACTCGCCGAAGGTATCGACGCGGCCAAGGGGAATTTCC GTCGCACCGCCGAGGCCCTCTCAACCGAGATTGCCCCACTGGCCACCGAAACCGACGCCGTCGGCATCGACCGCTATCGA CTGGCCTCCCGCCAATTCGTCGGCACCACCGTCGACCTCGCTGAAACGTACGAATGGGGAAAGCAGGAGCTCGCCCGCAT CGAACAGCTGCAGCGCGAGACAGCTGAGCGCATCCGCCCGGGAGCGAGCATCAAGGAGGCCATGGCCGTCCTCGACGCCG ACCCCGCATACCAGATCACCGGCACTGCGGCCCTCAAAGTCTGGATGCAGGAGCGCGCCGACGAAGCGATTTCCTCCCTG GACGGCACTCACTTCGAGGTACCCGAGCAGGCTAGGCACATCGAGGGCATGATCGCTCCCACCCACGACGGCGGCGTCTA CTACACCCCTCCATCCGATGACTTCTCCCGTCCCGGCCGCATGTGGTGGTCGGTGCCCGACGACACCAACACCTTCACCA CGTGGCGAGAACTCACCGCCGTCTACCACGAAGACGCTCCAGGCCATCACCTGCAGACTTCATCGGCCATCGCGGCCCGC GAGGAACTCAATTCCTGGCGCCGCAACTACTGGACGTCGGGTTATGGGGAAGGCTGGGCCCTCTATGCCGAGTGGCTGAT GGCCGATTTGGGGTACATGGACGATCCCGGCCACTTCATGGGCTTGCTCGACGGGCAGTCCATGCGCGCCGCCCGCGTCG TACTCGACATCGGCCTGCACTGCCAGTTCGAGGCCCCCGAGGAAATGGGCGGCGGCGAATGGAATTGGGATAAAGCCTGG GCCTTCTTCAATAACCACGTCTCGATGGACGAGGGCTCGGCCCGCTATGAGGTCAACCGCTACTTCGGGTGGCCTGGACA AGCCCCCTCCTACAAGCTCGGCGAGCGCACCTGGCTGGAGCTGAGGGAGGCTGCGAAGGCCAAGGATCCGAACTTCGACC TTAAGGAGTTTCACACCACAGCACTGCGGATGGGAGCTCTGCCACTGGATGTGCTGCGTCGAGCGATGCTGTCCTAG
Upstream 100 bases:
>100_bases ACCGGCACGATGACCTCTTCACGAAACCAACACGCTTTTTGCTGGAACACCGCATGCCACGCACCCGTCGTCGGCTCGGT ATAACGTCATCGTTGTGACC
Downstream 100 bases:
>100_bases CTGGGCTCCTGAGTTTTGCGGGGGCGTGTGTGATCAAGGATTACGCACGCACAAGGCCCCGACATACCCGGTGTCGTGGC TCAACTCGTGGCGTACCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MDNAHTTHQMGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLAMDTLDRLDQAMPADDTDRIT VAAMRSSLGLEAESHDKGYDLLSLNGIASGVHEIREVYDAMPTETPDQVSTIARRLHATGPALDGWLATQRASIDAGIPA AIRQVDLLVEQITAWTSDGGFFDDYLKRTASRDLPDAVTTALAEGIDAAKGNFRRTAEALSTEIAPLATETDAVGIDRYR LASRQFVGTTVDLAETYEWGKQELARIEQLQRETAERIRPGASIKEAMAVLDADPAYQITGTAALKVWMQERADEAISSL DGTHFEVPEQARHIEGMIAPTHDGGVYYTPPSDDFSRPGRMWWSVPDDTNTFTTWRELTAVYHEDAPGHHLQTSSAIAAR EELNSWRRNYWTSGYGEGWALYAEWLMADLGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAW AFFNNHVSMDEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTTALRMGALPLDVLRRAMLS
Sequences:
>Translated_558_residues MDNAHTTHQMGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLAMDTLDRLDQAMPADDTDRIT VAAMRSSLGLEAESHDKGYDLLSLNGIASGVHEIREVYDAMPTETPDQVSTIARRLHATGPALDGWLATQRASIDAGIPA AIRQVDLLVEQITAWTSDGGFFDDYLKRTASRDLPDAVTTALAEGIDAAKGNFRRTAEALSTEIAPLATETDAVGIDRYR LASRQFVGTTVDLAETYEWGKQELARIEQLQRETAERIRPGASIKEAMAVLDADPAYQITGTAALKVWMQERADEAISSL DGTHFEVPEQARHIEGMIAPTHDGGVYYTPPSDDFSRPGRMWWSVPDDTNTFTTWRELTAVYHEDAPGHHLQTSSAIAAR EELNSWRRNYWTSGYGEGWALYAEWLMADLGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAW AFFNNHVSMDEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTTALRMGALPLDVLRRAMLS >Mature_558_residues MDNAHTTHQMGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLAMDTLDRLDQAMPADDTDRIT VAAMRSSLGLEAESHDKGYDLLSLNGIASGVHEIREVYDAMPTETPDQVSTIARRLHATGPALDGWLATQRASIDAGIPA AIRQVDLLVEQITAWTSDGGFFDDYLKRTASRDLPDAVTTALAEGIDAAKGNFRRTAEALSTEIAPLATETDAVGIDRYR LASRQFVGTTVDLAETYEWGKQELARIEQLQRETAERIRPGASIKEAMAVLDADPAYQITGTAALKVWMQERADEAISSL DGTHFEVPEQARHIEGMIAPTHDGGVYYTPPSDDFSRPGRMWWSVPDDTNTFTTWRELTAVYHEDAPGHHLQTSSAIAAR EELNSWRRNYWTSGYGEGWALYAEWLMADLGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAW AFFNNHVSMDEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTTALRMGALPLDVLRRAMLS
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62030; Mature: 62030
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNAHTTHQMGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLA CCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH MDTLDRLDQAMPADDTDRITVAAMRSSLGLEAESHDKGYDLLSLNGIASGVHEIREVYDA HHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHH MPTETPDQVSTIARRLHATGPALDGWLATQRASIDAGIPAAIRQVDLLVEQITAWTSDGG CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC FFDDYLKRTASRDLPDAVTTALAEGIDAAKGNFRRTAEALSTEIAPLATETDAVGIDRYR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LASRQFVGTTVDLAETYEWGKQELARIEQLQRETAERIRPGASIKEAMAVLDADPAYQIT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEC GTAALKVWMQERADEAISSLDGTHFEVPEQARHIEGMIAPTHDGGVYYTPPSDDFSRPGR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCEEECCCCCCCCCCCC MWWSVPDDTNTFTTWRELTAVYHEDAPGHHLQTSSAIAAREELNSWRRNYWTSGYGEGWA EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH LYAEWLMADLGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAW HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHEECCEEEECCHHHCCCCCCCHHHHH AFFNNHVSMDEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTT HHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH ALRMGALPLDVLRRAMLS HHHHCCCCHHHHHHHHCC >Mature Secondary Structure MDNAHTTHQMGSEVDEVADHYWAALVQSSPTLATALGLDLNQDEYDDLSPAGLDAQYRLA CCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH MDTLDRLDQAMPADDTDRITVAAMRSSLGLEAESHDKGYDLLSLNGIASGVHEIREVYDA HHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHH MPTETPDQVSTIARRLHATGPALDGWLATQRASIDAGIPAAIRQVDLLVEQITAWTSDGG CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC FFDDYLKRTASRDLPDAVTTALAEGIDAAKGNFRRTAEALSTEIAPLATETDAVGIDRYR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LASRQFVGTTVDLAETYEWGKQELARIEQLQRETAERIRPGASIKEAMAVLDADPAYQIT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEC GTAALKVWMQERADEAISSLDGTHFEVPEQARHIEGMIAPTHDGGVYYTPPSDDFSRPGR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEECCCCCEEECCCCCCCCCCCC MWWSVPDDTNTFTTWRELTAVYHEDAPGHHLQTSSAIAAREELNSWRRNYWTSGYGEGWA EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH LYAEWLMADLGYMDDPGHFMGLLDGQSMRAARVVLDIGLHCQFEAPEEMGGGEWNWDKAW HHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHEECCEEEECCHHHCCCCCCCHHHHH AFFNNHVSMDEGSARYEVNRYFGWPGQAPSYKLGERTWLELREAAKAKDPNFDLKEFHTT HHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH ALRMGALPLDVLRRAMLS HHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA