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The map label for this gene is yulF [H]

Identifier: 50841712

GI number: 50841712

Start: 274536

End: 275456

Strand: Reverse

Name: yulF [H]

Synonym: PPA0219

Alternate gene names: 50841712

Gene position: 275456-274536 (Counterclockwise)

Preceding gene: 50841715

Following gene: 50841711

Centisome position: 10.76

GC content: 60.04

Gene sequence:

>921_bases
ATGGACACCACGACCACCATCGGTTGGGGAATCGCAGGCACTGGACGTATCGCTCGCACGATTCTTAAAGACTTCGCACA
TGTCCCGGGAGCACGCATCTGCGCTATCGCGTCAAGGTCGGCAGCCCGCGCCGATGCTTTTGCCGATCTGGTTACTCAGA
ACCTGAGTTGTCCCCGCCCAGACACTCATGATTCCTATGTCGACATGATCACCAACCCCACAGTGGACGTCGTTTACGTG
GCAACCCCGCACCCTCAGCATCGACCGATCGCCCTGGCTGCCATTGACGCCGGGAAGGCTGTTCTCGTCGAGAAATCCTT
CGCCGCAACTGCCCATGCGGCTGCCGAAATAGCTGAGGCTGCTCGGGCTAAAAGGGTCTTTGCCATGGAGGGGATGTGGA
CCCGGTTTTTGCCTGTCGTTACCGAGATGATCGACGCCGTCAACAATGGCGCGATCGGCGAGCCGACGGGTATCCAGGGA
GATTTGTTCGCCCTGCGCGATTATGACCCTGACGACCGTCTCTTCTCCCCAGCTCTAGGTGGTGGAGTAACCCTTGACCT
CGGCGTCTATGCCCTCGATTTCGCCATTCGCCTCTTTGGAGAGCCCACTGAGGTCATCGCCCGTGGCAACCACTTCCCCA
ATGGGGTGGATTCCGACGCTTCGATGCTGCTGACTTTCCCAAAGAACAAATTCGCCACGCTGGCCATCTCGTTCACCTCC
GACGGTCCGGGACGCATGACTATTCAAGGCACCGACGGCTGGATAGAGGTCGAGCCTAGGTTCCACCACCCCAGCCGTAT
CCTCATCCACCGCCGCGGAGTCATCCCGGAGATCCACAACACCCCCGCGCTGGGCCGCGGCTACGCTCACGAACTCATGG
AGGTCTGCCAATGTCTGCGAGCGGACGCACCGAGAGCCTGA

Upstream 100 bases:

>100_bases
CACGGTACGCGATACGGATGCTTTTTGACAAGGGACCAAATAGTCAAACTGACTGCACGATGGACCATGATATCGCATAC
ACCTACTCTAGAGTTACCCC

Downstream 100 bases:

>100_bases
CGATGCCACTCGACGACACGCTGGCGGTAGCCAGGACGATGTCTCGAGTCCTCGACCAGCTCGGTGTGGAGAACTACGAC
GACACTGAACTGTCCCACGC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRPDTHDSYVDMITNPTVDVVYV
ATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEAARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQG
DLFALRDYDPDDRLFSPALGGGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS
DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLRADAPRA

Sequences:

>Translated_306_residues
MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRPDTHDSYVDMITNPTVDVVYV
ATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEAARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQG
DLFALRDYDPDDRLFSPALGGGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS
DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLRADAPRA
>Mature_306_residues
MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRPDTHDSYVDMITNPTVDVVYV
ATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEAARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQG
DLFALRDYDPDDRLFSPALGGGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS
DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLRADAPRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=301, Percent_Identity=27.5747508305648, Blast_Score=128, Evalue=6e-30,
Organism=Escherichia coli, GI87081947, Length=251, Percent_Identity=25.0996015936255, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581117, Length=269, Percent_Identity=29.7397769516729, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24584727, Length=308, Percent_Identity=27.5974025974026, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24581115, Length=262, Percent_Identity=28.2442748091603, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32950; Mature: 32950

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRP
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DTHDSYVDMITNPTVDVVYVATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEA
CCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHH
ARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQGDLFALRDYDPDDRLFSPALG
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCC
GGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS
CCEEEEHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLR
CCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADAPRA
CCCCCC
>Mature Secondary Structure
MDTTTTIGWGIAGTGRIARTILKDFAHVPGARICAIASRSAARADAFADLVTQNLSCPRP
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DTHDSYVDMITNPTVDVVYVATPHPQHRPIALAAIDAGKAVLVEKSFAATAHAAAEIAEA
CCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHH
ARAKRVFAMEGMWTRFLPVVTEMIDAVNNGAIGEPTGIQGDLFALRDYDPDDRLFSPALG
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCC
GGVTLDLGVYALDFAIRLFGEPTEVIARGNHFPNGVDSDASMLLTFPKNKFATLAISFTS
CCEEEEHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
DGPGRMTIQGTDGWIEVEPRFHHPSRILIHRRGVIPEIHNTPALGRGYAHELMEVCQCLR
CCCCEEEEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADAPRA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]