Click here to switch to the map view.

The map label for this gene is rhsA [H]

Identifier: 50841692

GI number: 50841692

Start: 247886

End: 250678

Strand: Reverse

Name: rhsA [H]

Synonym: PPA0200

Alternate gene names: 50841692

Gene position: 250678-247886 (Counterclockwise)

Preceding gene: 50841693

Following gene: 50841691

Centisome position: 9.79

GC content: 60.22

Gene sequence:

>2793_bases
GTGGTCGATTTCAGTGTTTTCGGCGACTACCAGAATCCCGTAGAATTCAATTTCTCAACAGCCGAAGGGTTCTCTAGCCA
GCTGCGTTGGACCTCGCAACGCATAAACATTTTTGACGCGCGAACGTCGCTCGTTGAGTCCATCGCCTCACGAGGGTTTC
GGGGATTCTTCGCGACTGTCTTCACACAGAACATCCACATATGTTCCGCGGACGCTACGGCGTTGTCAGAGGCATTGACC
ACCGCCGCCGACATGGTGGACTATCTTGCCGAGCAAGCTCGGTTAGAGAATAAGCGACGCCAACAGGTTCGCGATTTCGC
TGCGCAACATGACGATTTTGGTGACCATGTGCGCGATTTCTTCACCGGCGTCGATGTTCCGCCCAACCTCACTCCTGCCG
AGCCTCCCTCCCCCCAGCTGCTCCATCCGCCTGTGACAGGAGATCGTCAGCAGGATCGGTCGATCCGAGGCTCATCGGGT
GGAATATCTGCGGCGGACCCCAAGGATCTCATCAGTGCCGCGCAGGTGTTGGGGGAAACCGCAGCACAGGTACCCTCGGG
ATCAGTCCTGGCGGGCTGGTTCGACGACTTCACCTCCCAGTGCAAGTACGGCACCGTGGAGGTCGGGGATCTGTTCGTGC
AGCTGGATCGGTGGCGGGGCCTCAATGACGGAGACGTCGAGTGGTTGCACGCGGTAGCCAAGGCCTTTCAAGCTGCTGGC
TCTGGTGTTATTACCTTGCCTAACTCTGCCCTGCGAGCCGCCTTGAGAGCTGCTGGAACCCCTTTGTGGCGTACCGATCT
CGACATCACATCCCCGGGGCTGTCGGGTATTGATCCGCGCACTGGATACGTTGAGGATCCCATCAACTCGGCAACCGGGA
ATTTCATCGAGCCCGAGACCGATCTGGCCTTCGCGGCAGCGTCATCCCCCCTCGCCCTCAGCAGGATGTACAACTCTATT
CAGGCTGTTCGGGGACAGGGTGGGGTTTTCGGCCCGGGGTGGGTCAGCATCCTTGACCAGTGCCTGCTCGTCAAGCCGGG
GTGCGTCGAGTGGGTGCGTGAGGATGGCAGGCATATCGCCTTCGCGGTGGAGGCTGCACCGACAGCAGTCCTGCCGACGA
CCAATCAGCTGCCCAATCCGGCAGAGGAAGACGAAAAGCCTGTCGAACAGTGGCGAGCTCAGGGTGAGAATCTGTGGCTC
AGCCGGGTCTCTGCTTCCCAACTTCCGGAGTTCCTTCGCGATCCGGCCACATCAAAATGGGTGTGGGTGATCTCGGACAA
CCGGGGAGGTCGATGGGTTTTCACTGAAGGTGGCGCATGGGTGTGCAGCGGATCTTCGCAAAGAGACGTCGTGCATACCG
TGCGGGAAGGCGATCGCGTGACCGCGATGGAAACGTCGTGGGGTCACAAGATCACCGTGTCGTATGGCGGCGCCAGAGTG
GTGTCGGCTATTTCCAGTGATGGCCGTTGTGTCCGGTACTCCTATGATGACGAAAATCGACTCGTCCAGGTAGACGGGCC
TGACGGTTCACGGCGTTACGAGTGGGATGACACACTCATCACGACCGTGGTGGATGCATGTGGCAACGCGGAATGCATCA
ACAGTTATGACGGCCGGGGCCGGATCACGTCCCAACAAGCCGCTAACGGTCGTACTGTCCATTTCAGGTATCTGCCTGGG
GGCGTCACCGCCGCCAGCGATGCGGATGGCACCAATGCCAATACCTGGATATGTGATCCTCACGGTCGCACCACAGGTGT
GGTCGACGCCCATGGTGGCCAGGTTTCGATGACCTACGATTCCTTCGGCAATATGGTGCGTTGCGTCGATCGGGCTGGAA
ACGTTACCTCACACCGCTATGACCAGCGAGGGAGACTGACGCACACGGACCTTCCTACTGGAGGCACGATTGACTGTTCG
TGGGATGATCTGGACCGGCTTGTGAGCACAACCCTGGCCAATGGCGCCCAGACCACCTTCGAGTATGACGGCACCGAGCG
TGATCCAGTGCGCGTCACGGATCCGTGCGGTGGCGTCACCGTTGCGGAGTGGAAGGATGGATTGCTTCTGCGCGCCACGA
ATCCTGTCGGGGTGAGCCTGAGGTTTTCCTATGACCATCATGCAGAATTGGTGCGCGTCGAGGATGCCCATGGGGAGGCT
TCCCGCCTCATCCGTGACGAGGCGGGACGGATCGTCGAAACGATCTCGCCGGGTGGCGCCACGACGCGGTTCAGCTACGA
CGACGCTGGCCGCCTGGCTGCCGTGGTCACACCGGATGGCGCGACATGGGAGCATCGTTATGATGTGGCCGGTCATCTGA
TCGAGTTGGTTGCCCCCGATAGTGGGGTCACAAAGTGGGAGTATCACCCAGACGGCCAGATCTCCAGGGTCATCGATCCT
CTCGGGCGCGTCATTGAACACTCCTACGACCACTTGGGGAACCTGGCGGGCATGCAGCTCCCCGACGGCAGCGCTTGGAG
CTTCATCCATGACGCGCTATCGCGGTTGACGCAGGTGGTGGCACCGGACGAGGCCAGGTGGACGTATGCCTATGACGTTG
ATGGCAATCTTTCCGGCGTCACTGATCCAGCCGGTTTCGCCAGGCCAGGGTCTTTACTGACGGTCTCACTGCCAGCACCG
CCTCGGATAGTCACGGGCACCAACTCCACCGCGTCGATGCCGATCCCTACGGTCTTACTACTGCCGTCACCGATGTCACT
GGCGCCCAGCAGATCGTCACGCGTGATTTGTGTGGCCGACCGGTTGAGTTTCAGGACGAGTCTGGCGCGGTGA

Upstream 100 bases:

>100_bases
CTCAAAAGTCTAGCGCCTGCCGACTGCGCTCAGGACATGCCGGCAGGCCAGGCAGTGGAGCATCACGCTGCACTTTGCCC
AAAGAGCAAGGGAGCATTCA

Downstream 100 bases:

>100_bases
CTCATGTGGAGCGCGATCTAGCGGGCCGCATTGTGGCCCTCGTCAGCCCCACCGGGCTGCGCACGAGTTACAGCTATGAC
GCGTGTGGGAGGATGGTTGA

Product: RHS-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 930; Mature: 930

Protein sequence:

>930_residues
MVDFSVFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFDARTSLVESIASRGFRGFFATVFTQNIHICSADATALSEALT
TAADMVDYLAEQARLENKRRQQVRDFAAQHDDFGDHVRDFFTGVDVPPNLTPAEPPSPQLLHPPVTGDRQQDRSIRGSSG
GISAADPKDLISAAQVLGETAAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG
SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYVEDPINSATGNFIEPETDLAFAAASSPLALSRMYNSI
QAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIAFAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWL
SRVSASQLPEFLRDPATSKWVWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGHKITVSYGGARV
VSAISSDGRCVRYSYDDENRLVQVDGPDGSRRYEWDDTLITTVVDACGNAECINSYDGRGRITSQQAANGRTVHFRYLPG
GVTAASDADGTNANTWICDPHGRTTGVVDAHGGQVSMTYDSFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGGTIDCS
WDDLDRLVSTTLANGAQTTFEYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA
SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPDSGVTKWEYHPDGQISRVIDP
LGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVVAPDEARWTYAYDVDGNLSGVTDPAGFARPGSLLTVSLPAP
PRIVTGTNSTASMPIPTVLLLPSPMSLAPSRSSRVICVADRLSFRTSLAR

Sequences:

>Translated_930_residues
MVDFSVFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFDARTSLVESIASRGFRGFFATVFTQNIHICSADATALSEALT
TAADMVDYLAEQARLENKRRQQVRDFAAQHDDFGDHVRDFFTGVDVPPNLTPAEPPSPQLLHPPVTGDRQQDRSIRGSSG
GISAADPKDLISAAQVLGETAAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG
SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYVEDPINSATGNFIEPETDLAFAAASSPLALSRMYNSI
QAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIAFAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWL
SRVSASQLPEFLRDPATSKWVWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGHKITVSYGGARV
VSAISSDGRCVRYSYDDENRLVQVDGPDGSRRYEWDDTLITTVVDACGNAECINSYDGRGRITSQQAANGRTVHFRYLPG
GVTAASDADGTNANTWICDPHGRTTGVVDAHGGQVSMTYDSFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGGTIDCS
WDDLDRLVSTTLANGAQTTFEYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA
SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPDSGVTKWEYHPDGQISRVIDP
LGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVVAPDEARWTYAYDVDGNLSGVTDPAGFARPGSLLTVSLPAP
PRIVTGTNSTASMPIPTVLLLPSPMSLAPSRSSRVICVADRLSFRTSLAR
>Mature_930_residues
MVDFSVFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFDARTSLVESIASRGFRGFFATVFTQNIHICSADATALSEALT
TAADMVDYLAEQARLENKRRQQVRDFAAQHDDFGDHVRDFFTGVDVPPNLTPAEPPSPQLLHPPVTGDRQQDRSIRGSSG
GISAADPKDLISAAQVLGETAAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG
SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYVEDPINSATGNFIEPETDLAFAAASSPLALSRMYNSI
QAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIAFAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWL
SRVSASQLPEFLRDPATSKWVWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGHKITVSYGGARV
VSAISSDGRCVRYSYDDENRLVQVDGPDGSRRYEWDDTLITTVVDACGNAECINSYDGRGRITSQQAANGRTVHFRYLPG
GVTAASDADGTNANTWICDPHGRTTGVVDAHGGQVSMTYDSFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGGTIDCS
WDDLDRLVSTTLANGAQTTFEYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA
SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPDSGVTKWEYHPDGQISRVIDP
LGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVVAPDEARWTYAYDVDGNLSGVTDPAGFARPGSLLTVSLPAP
PRIVTGTNSTASMPIPTVLLLPSPMSLAPSRSSRVICVADRLSFRTSLAR

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1790020, Length=424, Percent_Identity=23.8207547169811, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI48994942, Length=424, Percent_Identity=23.8207547169811, Blast_Score=93, Evalue=9e-20,
Organism=Escherichia coli, GI1786917, Length=421, Percent_Identity=23.7529691211401, Blast_Score=90, Evalue=9e-19,
Organism=Escherichia coli, GI1786706, Length=397, Percent_Identity=25.1889168765743, Blast_Score=87, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 100806; Mature: 100806

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFSVFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFDARTSLVESIASRGFRGFFATV
CCCEEEECCCCCCEEEEECHHHCHHHHHEEHHHHEEEEHHHHHHHHHHHHCCCHHHHHHH
FTQNIHICSADATALSEALTTAADMVDYLAEQARLENKRRQQVRDFAAQHDDFGDHVRDF
HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FTGVDVPPNLTPAEPPSPQLLHPPVTGDRQQDRSIRGSSGGISAADPKDLISAAQVLGET
HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG
HHHCCCCCEEEHHHHHHHHHCCCCCEEHHHEEEEHHHHCCCCCCCHHHHHHHHHHHHHCC
SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYVEDPINSATGNFIEPET
CCEEECCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLAFAAASSPLALSRMYNSIQAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIA
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEE
FAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWLSRVSASQLPEFLRDPATSKW
EEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCE
VWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGHKITVSYGGARV
EEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCEEEEEECCCCCEEEEEECCHHH
VSAISSDGRCVRYSYDDENRLVQVDGPDGSRRYEWDDTLITTVVDACGNAECINSYDGRG
HHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEECCHHHHHHHHHHCCCCHHHCCCCCCC
RITSQQAANGRTVHFRYLPGGVTAASDADGTNANTWICDPHGRTTGVVDAHGGQVSMTYD
CEEHHHCCCCCEEEEEECCCCCEECCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEHH
SFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGGTIDCSWDDLDRLVSTTLANGAQTTF
HHCHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCEEECCHHHHHHHHHHHHCCCCCEEE
EYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA
EECCCCCCCEEEECCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCHH
SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPD
HHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHEEEEECCC
SGVTKWEYHPDGQISRVIDPLGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVV
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
APDEARWTYAYDVDGNLSGVTDPAGFARPGSLLTVSLPAPPRIVTGTNSTASMPIPTVLL
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEE
LPSPMSLAPSRSSRVICVADRLSFRTSLAR
CCCCCCCCCCCCCCEEEEECCHHHHHHHCC
>Mature Secondary Structure
MVDFSVFGDYQNPVEFNFSTAEGFSSQLRWTSQRINIFDARTSLVESIASRGFRGFFATV
CCCEEEECCCCCCEEEEECHHHCHHHHHEEHHHHEEEEHHHHHHHHHHHHCCCHHHHHHH
FTQNIHICSADATALSEALTTAADMVDYLAEQARLENKRRQQVRDFAAQHDDFGDHVRDF
HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FTGVDVPPNLTPAEPPSPQLLHPPVTGDRQQDRSIRGSSGGISAADPKDLISAAQVLGET
HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAQVPSGSVLAGWFDDFTSQCKYGTVEVGDLFVQLDRWRGLNDGDVEWLHAVAKAFQAAG
HHHCCCCCEEEHHHHHHHHHCCCCCEEHHHEEEEHHHHCCCCCCCHHHHHHHHHHHHHCC
SGVITLPNSALRAALRAAGTPLWRTDLDITSPGLSGIDPRTGYVEDPINSATGNFIEPET
CCEEECCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DLAFAAASSPLALSRMYNSIQAVRGQGGVFGPGWVSILDQCLLVKPGCVEWVREDGRHIA
CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEE
FAVEAAPTAVLPTTNQLPNPAEEDEKPVEQWRAQGENLWLSRVSASQLPEFLRDPATSKW
EEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCE
VWVISDNRGGRWVFTEGGAWVCSGSSQRDVVHTVREGDRVTAMETSWGHKITVSYGGARV
EEEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHCCCEEEEEECCCCCEEEEEECCHHH
VSAISSDGRCVRYSYDDENRLVQVDGPDGSRRYEWDDTLITTVVDACGNAECINSYDGRG
HHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEECCHHHHHHHHHHCCCCHHHCCCCCCC
RITSQQAANGRTVHFRYLPGGVTAASDADGTNANTWICDPHGRTTGVVDAHGGQVSMTYD
CEEHHHCCCCCEEEEEECCCCCEECCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEHH
SFGNMVRCVDRAGNVTSHRYDQRGRLTHTDLPTGGTIDCSWDDLDRLVSTTLANGAQTTF
HHCHHHHHHHHCCCCCHHCCCCCCCEEECCCCCCCEEECCHHHHHHHHHHHHCCCCCEEE
EYDGTERDPVRVTDPCGGVTVAEWKDGLLLRATNPVGVSLRFSYDHHAELVRVEDAHGEA
EECCCCCCCEEEECCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCHH
SRLIRDEAGRIVETISPGGATTRFSYDDAGRLAAVVTPDGATWEHRYDVAGHLIELVAPD
HHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHEEEEECCC
SGVTKWEYHPDGQISRVIDPLGRVIEHSYDHLGNLAGMQLPDGSAWSFIHDALSRLTQVV
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
APDEARWTYAYDVDGNLSGVTDPAGFARPGSLLTVSLPAPPRIVTGTNSTASMPIPTVLL
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEE
LPSPMSLAPSRSSRVICVADRLSFRTSLAR
CCCCCCCCCCCCCCEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2403547; 8041620; 9278503; 7934896 [H]