| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841693
Identifier: 50841693
GI number: 50841693
Start: 250798
End: 251520
Strand: Reverse
Name: 50841693
Synonym: PPA0201
Alternate gene names: NA
Gene position: 251520-250798 (Counterclockwise)
Preceding gene: 50841694
Following gene: 50841692
Centisome position: 9.82
GC content: 53.94
Gene sequence:
>723_bases ATGACCAAGAAATTGACGAAAACCTGTTTGCTGGGCGTGGTCGGCATCATGGCGATCAGCCTTGCAGCGTGCGGGGACAA GACAAACTCGTCATCCGATACCCCCGCAAACCCCTCGCCGTCCACCAAGGCGGTCAAGCGAATTAGCAAGGACGACTTCA CCAAGGCGTTCTCCCACAAGAAGATCGATGGCCACACGTTTGTCATCCAGGACAACTCTCAGCTCAGGCCCGTTGTGGAC AATCTCGACAAGACGCTCAGTCAAGCGAAGATCTCCCCAGCTGGATGCGATGCGGCTCTCAGGCAGTCCTCCCTCGGCCT CACTTCACACGAGATCAGCGACACTCTCGTGGCCGTCAGTGACAAACCATCCACACGAATCATCGTCACCACGGCCATGT CCGACCGACAGAAGAAGGCATACAAATCACAAGAAGAACAAACTTCCAAGTGCGGTCATACCACGTTGTCCACGCAAGGT GTCAATCACGGCCTGGAAATAAACATCAAGGCGTCACCCATCAAGGGTTACGAAAATATCTCCAAGCAAGCCGCTCTTTT CGATGTCTCCATCAAAAGGAGTACCGGAACCTCTGATCACGGCTATCAGGCATACATCTGGCTCAACAATGATCAGGCGA TCCGCATCTTCGGACGAGACGCCGGAATAGTCAAGTCCACGCTGCAGTCAGCCACCAAAGCACTGGGAATCGCCAAGAAG TGA
Upstream 100 bases:
>100_bases GTCACTCGCTCACTCCTCAAGGCCGGTGGTTATGTCCTGCCGTAAAGAGCGGGTATATTTCTCTGAGCATAAATCAAAAC GGCGCAAAGGTGACCACAGA
Downstream 100 bases:
>100_bases CACAGGACGTATAGCAGCCCTCAAAAGTCTAGCGCCTGCCGACTGCGCTCAGGACATGCCGGCAGGCCAGGCAGTGGAGC ATCACGCTGCACTTTGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVD NLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQG VNHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK
Sequences:
>Translated_240_residues MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVD NLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQG VNHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK >Mature_239_residues TKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVDN LDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGV NHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25753; Mature: 25621
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC KIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVS CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCEEEEEC DKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGVNHGLEINIKASPIKGYENI CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHH SKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK HHHHEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC KIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVS CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCEEEEEC DKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGVNHGLEINIKASPIKGYENI CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHH SKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK HHHHEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA