Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50841693

Identifier: 50841693

GI number: 50841693

Start: 250798

End: 251520

Strand: Reverse

Name: 50841693

Synonym: PPA0201

Alternate gene names: NA

Gene position: 251520-250798 (Counterclockwise)

Preceding gene: 50841694

Following gene: 50841692

Centisome position: 9.82

GC content: 53.94

Gene sequence:

>723_bases
ATGACCAAGAAATTGACGAAAACCTGTTTGCTGGGCGTGGTCGGCATCATGGCGATCAGCCTTGCAGCGTGCGGGGACAA
GACAAACTCGTCATCCGATACCCCCGCAAACCCCTCGCCGTCCACCAAGGCGGTCAAGCGAATTAGCAAGGACGACTTCA
CCAAGGCGTTCTCCCACAAGAAGATCGATGGCCACACGTTTGTCATCCAGGACAACTCTCAGCTCAGGCCCGTTGTGGAC
AATCTCGACAAGACGCTCAGTCAAGCGAAGATCTCCCCAGCTGGATGCGATGCGGCTCTCAGGCAGTCCTCCCTCGGCCT
CACTTCACACGAGATCAGCGACACTCTCGTGGCCGTCAGTGACAAACCATCCACACGAATCATCGTCACCACGGCCATGT
CCGACCGACAGAAGAAGGCATACAAATCACAAGAAGAACAAACTTCCAAGTGCGGTCATACCACGTTGTCCACGCAAGGT
GTCAATCACGGCCTGGAAATAAACATCAAGGCGTCACCCATCAAGGGTTACGAAAATATCTCCAAGCAAGCCGCTCTTTT
CGATGTCTCCATCAAAAGGAGTACCGGAACCTCTGATCACGGCTATCAGGCATACATCTGGCTCAACAATGATCAGGCGA
TCCGCATCTTCGGACGAGACGCCGGAATAGTCAAGTCCACGCTGCAGTCAGCCACCAAAGCACTGGGAATCGCCAAGAAG
TGA

Upstream 100 bases:

>100_bases
GTCACTCGCTCACTCCTCAAGGCCGGTGGTTATGTCCTGCCGTAAAGAGCGGGTATATTTCTCTGAGCATAAATCAAAAC
GGCGCAAAGGTGACCACAGA

Downstream 100 bases:

>100_bases
CACAGGACGTATAGCAGCCCTCAAAAGTCTAGCGCCTGCCGACTGCGCTCAGGACATGCCGGCAGGCCAGGCAGTGGAGC
ATCACGCTGCACTTTGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVD
NLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQG
VNHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK

Sequences:

>Translated_240_residues
MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVD
NLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQG
VNHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK
>Mature_239_residues
TKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHKKIDGHTFVIQDNSQLRPVVDN
LDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVSDKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGV
NHGLEINIKASPIKGYENISKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25753; Mature: 25621

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
KIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCEEEEEC
DKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGVNHGLEINIKASPIKGYENI
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHH
SKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK
HHHHEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKKLTKTCLLGVVGIMAISLAACGDKTNSSSDTPANPSPSTKAVKRISKDDFTKAFSHK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
KIDGHTFVIQDNSQLRPVVDNLDKTLSQAKISPAGCDAALRQSSLGLTSHEISDTLVAVS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCEEEEEC
DKPSTRIIVTTAMSDRQKKAYKSQEEQTSKCGHTTLSTQGVNHGLEINIKASPIKGYENI
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHH
SKQAALFDVSIKRSTGTSDHGYQAYIWLNNDQAIRIFGRDAGIVKSTLQSATKALGIAKK
HHHHEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA