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The map label for this gene is 50841597

Identifier: 50841597

GI number: 50841597

Start: 127386

End: 128630

Strand: Reverse

Name: 50841597

Synonym: PPA0106

Alternate gene names: NA

Gene position: 128630-127386 (Counterclockwise)

Preceding gene: 50841598

Following gene: 50841596

Centisome position: 5.02

GC content: 62.17

Gene sequence:

>1245_bases
ATGTCCATCAATCGTCTGGTGGCGGGTCTGGCCGCCACCACCATGTGCGTCGCCACCCTCACCGGGTGCTCACACTCCGA
GCAGTCGGGTTCCTCGGCGAACACGTCGTCCAGCGGGTCCTCCCGGCAGGGCTGCATCAAGGACTTCGACCCCTCGAAGG
ATTACTTCGGCGACAAGGCCACCTTCGGCGACGCTCGCGACATCACCGTGTCGTACCACAAGTCGTACAAGGTCGTGACG
CTCAAGCACCCGTCGAACACCGCGACGAAACCGGTGCAGTACGTCCTGGTGCAGTGTGGTGCCCCCGACCCGCATCTGGA
CGGTGAGCTCGCCAAGGCGCAGCGGATCACCATTCCCACCACCAAGGTGGCGTTGGGCTCGACGACCCTGCCAATGAAGT
TTCAGATGTTGGGAAAGCTGGACTCCGTGGCTGGCATGGTCAACGTCGACAGAGTCGGGAATCCGGACACCCGTCAGGCC
CTCAAGGACCACAAGGTCGCCAGTTTCGCGGCAGGCGACAACGCCACCGAGATCAACACCGAGAAATTGGCGGCATTGCG
CCCGGACCTGTTCATCTTCAACCTCGTCAGCGGCAGCGACAACACCAGCAAGATCGACAAGATCAAGGAGATGGGCATCC
CGGTCGTTGCCGAGCCGAACTTCCTCGAGAGCACCCCGCTGGGACGTGCCGAGTGGATCAAGTACGACTCGTTGTTCGTC
AATGCCGAGAAGACTGCGAACCAGAAGTATGACGAGATCGCCGAGAAGTACCACGCGACCGCGAAACGCACCGCCAAGGT
CAAGACACGACCGACCGTGCTCCACGGATCACAGTACAAGGGCGTCTGGTACATCAAACCCAACGAGAACTACGCCATCC
AGTTCCTGCGTGACGCCGGTGGTGAGTACGTGTTCAAGGACCTCCACGGGGTGGCCTCGAGGAAGCTGGACACCGAGGCC
GTCATCAAGCAGGCCCACGACGCCGACTTCTGGATCGACGGGCCGGAGAAGTCGTCCATCCCGCAGATCCTCAAGGCCGA
CCCACGTCTGAAGTCGCTCAAGGCCCTCGACAACGGCAATATGTGGGACGCCACCCCGCGAGCCGACCCGAAGCACGGCA
ACGACTACTGGCAGACCGGAGTCGTACGTCCCGACCTCGTCCTGGCGAACCTGACGGCGATCCTGCACCCCGAGCTGGAC
CGCGATCACCAGTTCCACTTCTACCGCAAGGCCACCGCGAAGTGA

Upstream 100 bases:

>100_bases
TCATGAAGGGGTACACCCCGTACTACTACACCAAGCTCAGCTGATCCCTCGACGGCGTTGCTCGCCGCACACCCTCCCTT
CACCATTTTCTGGAGCAAAC

Downstream 100 bases:

>100_bases
CTGCACCTCGGTACATGATGCAGTGCCGTCACGAGAGGCGCGAACGCCCCGAGGCACACCGCGGACGTATCAGGGGCAAC
CAGTGAGACACAGCCACCAG

Product: periplasmic-binding protein of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKATFGDARDITVSYHKSYKVVT
LKHPSNTATKPVQYVLVQCGAPDPHLDGELAKAQRITIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQA
LKDHKVASFAAGDNATEINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV
NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVASRKLDTEA
VIKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELD
RDHQFHFYRKATAK

Sequences:

>Translated_414_residues
MSINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKATFGDARDITVSYHKSYKVVT
LKHPSNTATKPVQYVLVQCGAPDPHLDGELAKAQRITIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQA
LKDHKVASFAAGDNATEINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV
NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVASRKLDTEA
VIKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELD
RDHQFHFYRKATAK
>Mature_413_residues
SINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKATFGDARDITVSYHKSYKVVTL
KHPSNTATKPVQYVLVQCGAPDPHLDGELAKAQRITIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQAL
KDHKVASFAAGDNATEINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVN
AEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVASRKLDTEAV
IKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELDR
DHQFHFYRKATAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 45538; Mature: 45407

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
TFGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGAPDPHLDGELAKAQRITIPT
CCCCCCEEEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHCCEEEECCC
TKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINT
CEEEECCCCCCHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCH
EKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECEEEE
NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAG
ECHHHHCHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCEEEEEECCCCEEEEEEECCC
GEYVFKDLHGVASRKLDTEAVIKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGN
CCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCCHHHHCCCCHHHHHHCCCCC
MWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELDRDHQFHFYRKATAK
CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SINRLVAGLAATTMCVATLTGCSHSEQSGSSANTSSSGSSRQGCIKDFDPSKDYFGDKA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
TFGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGAPDPHLDGELAKAQRITIPT
CCCCCCEEEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHCCEEEECCC
TKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINT
CEEEECCCCCCHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCH
EKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFV
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECEEEE
NAEKTANQKYDEIAEKYHATAKRTAKVKTRPTVLHGSQYKGVWYIKPNENYAIQFLRDAG
ECHHHHCHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCEEEEEECCCCEEEEEEECCC
GEYVFKDLHGVASRKLDTEAVIKQAHDADFWIDGPEKSSIPQILKADPRLKSLKALDNGN
CCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCCHHHHCCCCHHHHHHCCCCC
MWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHPELDRDHQFHFYRKATAK
CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]