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The map label for this gene is 50365281

Identifier: 50365281

GI number: 50365281

Start: 549468

End: 549896

Strand: Reverse

Name: 50365281

Synonym: Mfl464

Alternate gene names: NA

Gene position: 549896-549468 (Counterclockwise)

Preceding gene: 50365282

Following gene: 50365280

Centisome position: 69.32

GC content: 27.51

Gene sequence:

>429_bases
ATGAGTAATATTCTAGGTCTTGATGTTGGGAGCAAAACAATAGGTTTAGCTTCTTCAACAGGTAACGTAGCAAAGAAAGA
AATCAACTTAAAATTTGAAGAATGAAACTTTGAAGAAGGAGTTAGTTTATTAACTGAATTCATAAAAGATAAATCTTTTG
ATACATTTGTTTTTGGTTATCCTAAAAACATGAATGGATCAATTGGTGAAAGAGCTGAAATGGTTGATTATTTTATTGAA
GGATTTATGGTTTATAATCCAGAAATTAAAGAAGAACAAATAATTAGAATAGATGAAAGAAGAACTACTAAAATGGCTAA
GTCAATTATGATCGAAGCTGGGTTATCTCGTCAAAAACAAAAAGAAAACAAAGATACACTAGCTGCACAATTAATTTTAG
AAACATATTTAGAAAAAATTAAGAAATAA

Upstream 100 bases:

>100_bases
TTAACAGATATTACATTCGCATGTATTATGGCTGTCACTTGATTTTTAGTATTCGAAAATGTCTTTTTAAAAATGCTAAA
TAAAAAGCTTGGAGGAGATT

Downstream 100 bases:

>100_bases
TTGTTAATACCTATTGATTAAGAAATCAATAATAGGTATTATTTTTATATTACAAAATTTAAACAAAGGAGCACAATGAA
ATTACACCCATTAGTAAAAA

Product: Holliday junction resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSNILGLDVGSKTIGLASSTGNVAKKEINLKFEEWNFEEGVSLLTEFIKDKSFDTFVFGYPKNMNGSIGERAEMVDYFIE
GFMVYNPEIKEEQIIRIDERRTTKMAKSIMIEAGLSRQKQKENKDTLAAQLILETYLEKIKK

Sequences:

>Translated_142_residues
MSNILGLDVGSKTIGLASSTGNVAKKEINLKFEE*NFEEGVSLLTEFIKDKSFDTFVFGYPKNMNGSIGERAEMVDYFIE
GFMVYNPEIKEEQIIRIDERRTTKMAKSIMIEAGLSRQKQKENKDTLAAQLILETYLEKIKK
>Mature_141_residues
SNILGLDVGSKTIGLASSTGNVAKKEINLKFEE*NFEEGVSLLTEFIKDKSFDTFVFGYPKNMNGSIGERAEMVDYFIEG
FMVYNPEIKEEQIIRIDERRTTKMAKSIMIEAGLSRQKQKENKDTLAAQLILETYLEKIKK

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16039; Mature: 15907

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNILGLDVGSKTIGLASSTGNVAKKEINLKFEENFEEGVSLLTEFIKDKSFDTFVFGYP
CCCCCCCCCCCCCEECCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECC
KNMNGSIGERAEMVDYFIEGFMVYNPEIKEEQIIRIDERRTTKMAKSIMIEAGLSRQKQK
CCCCCCCCHHHHHHHHHHHCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCHHHHH
ENKDTLAAQLILETYLEKIKK
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNILGLDVGSKTIGLASSTGNVAKKEINLKFEENFEEGVSLLTEFIKDKSFDTFVFGYP
CCCCCCCCCCCCEECCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCEEEEECC
KNMNGSIGERAEMVDYFIEGFMVYNPEIKEEQIIRIDERRTTKMAKSIMIEAGLSRQKQK
CCCCCCCCHHHHHHHHHHHCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCHHHHH
ENKDTLAAQLILETYLEKIKK
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA