Definition | Mesoplasma florum L1, complete genome. |
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Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is treB [H]
Identifier: 50365249
GI number: 50365249
Start: 509047
End: 510591
Strand: Reverse
Name: treB [H]
Synonym: Mfl431
Alternate gene names: 50365249
Gene position: 510591-509047 (Counterclockwise)
Preceding gene: 50365250
Following gene: 50365248
Centisome position: 64.37
GC content: 27.77
Gene sequence:
>1545_bases ATGAAATTTACAAAAGAAAATATTGTATTTCTTTTAGAAAATGTTGGTGGATCTGAAAATATTGAAAAAATAAGTCACTG TATTTCTAGAATGAGATTTAAACTTGTAGATATTACAAAAGCTAACACTGAGGAAATCAAAAAGCAAAAATGATGTAAAG GTGTTTTAATTGTTGGTGGTGAATATCAAGTTGTTATAGGAACAGAAATTGAAAGTTTTTATAAAATGTTTTTAAAAACA ACTGGAATAAATGAAAACGCAAATGATGAGTTAAAAACTAAAAAACAAAAAATGACTTTTATTATGTTTGTTTCATCAAT TTTTAGCCCAATAATGATTTTGCTTGTTGTATACGGAATGTGAGAAATGGTAAGAACGCCTTTCTTCTTATCTTCTAATT CAACAGAAATTCCAACATTAATTGAAATTAATAGTTTTATGGAATTAATTTCAAAAGGATTAAGTTGATTTATTGTTATG GCAGTTTGTTGAAGTACATTTAGAGTAATGGGAGGGACACCAATTATAGGTTTAGCAATTGGCGCAATTCTTATTAGTCC AATGTTAACACCTCTTTCAGCACTTGATCTTGATGGTGGTAAAACAATAATACAAGCAATGAATGAACATGGTTGAAAAA TATTTGGAAACGCTGTTTTCCCATGAAAAGTTTCATTTGAAGGTTTAGTAATACCGATGATTTTTGTTGGTTTACTAGGA GTTTTCATTGAAAGAGGGATGAATAAAGTTAATTTAGGTGGAGCTAGAATGCTTATTCAACCAATGGTTGTTATTGCTGG AACAGTTATTGTAACTATGTTTACAATTGCTCCAGCAGGATTAATAATAACAAATTATATGTCTATATCATTTAACTTTT TAATGACACATAATATAACAAAATATATATTCTCACCATTAATAGGAATGCTATATGCACCAATGGTAGTATTTGGATTA CATAGAACAATAACACCTATATTAATGCAAGATATATTAAAATTTAACGGTAGTTTTATAATGGGGTTAATGATCATTTC TAACATTTGTTTAGCTGTAGGTTGTTTAACATTTGGAAGATTAAACAAAAACTGTAAAGAAGTAAAAAATATTGCATATT CTAATGGTATTTCTGCATTTATCGCAGGAGTAACTGAGCCTGCTATTTATTCAATTTCTTTAAAATATCTTTTCCCTTTA ATAGCTTCTGCTATAGGAACATATTTTGGATGCTTATTGTATACTTCAGCTGGAGTTTGAACAAATGCAGCACCTTTTGG TATTTTAGGAATAATCGGTTTTGCTTCAACTATACCACAAGGCATAAATGTAGAACAATGAGCTGGTGGTTCAATTGTTT GAGGAACACTAAGTGTAATTTTGGGAATATCAATAACAATATTTATGACAATAGTTTTAAGTCAAGTTAAATATTTTAAA GAAAGAACAAATAAAATACTTTTTGATGAATACGGATTTACTCCTGAATTAAAACAAAAAAGTATATTTAAATTTAAAGG TAATAAAAATGGAAAAATTAAGTAA
Upstream 100 bases:
>100_bases AATACTAAACTAGTTTTTAGAAAACAAACTAGTTTAGTATTTTATTTTACTTTAGCATTTTTATAAAAAATGAGTTGAAA TATATACAAAGGAGAATTTT
Downstream 100 bases:
>100_bases AGATATAATGTTGGGAACTTCAATATCAGCTAATCAAGCAGAAGGTTCATGAAATATTAATGGTAAAGGTTTATCAATAG CTGAAATGCGTAGATATAAT
Product: trehalose/sucrose/beta-glucoside PTS system IIBC component
Products: NA
Alternate protein names: EIIBC-Tre; EII-Tre; Trehalose-specific phosphotransferase enzyme IIB component; PTS system trehalose-specific EIIB component; Trehalose permease IIC component; PTS system trehalose-specific EIIC component [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MKFTKENIVFLLENVGGSENIEKISHCISRMRFKLVDITKANTEEIKKQKWCKGVLIVGGEYQVVIGTEIESFYKMFLKT TGINENANDELKTKKQKMTFIMFVSSIFSPIMILLVVYGMWEMVRTPFFLSSNSTEIPTLIEINSFMELISKGLSWFIVM AVCWSTFRVMGGTPIIGLAIGAILISPMLTPLSALDLDGGKTIIQAMNEHGWKIFGNAVFPWKVSFEGLVIPMIFVGLLG VFIERGMNKVNLGGARMLIQPMVVIAGTVIVTMFTIAPAGLIITNYMSISFNFLMTHNITKYIFSPLIGMLYAPMVVFGL HRTITPILMQDILKFNGSFIMGLMIISNICLAVGCLTFGRLNKNCKEVKNIAYSNGISAFIAGVTEPAIYSISLKYLFPL IASAIGTYFGCLLYTSAGVWTNAAPFGILGIIGFASTIPQGINVEQWAGGSIVWGTLSVILGISITIFMTIVLSQVKYFK ERTNKILFDEYGFTPELKQKSIFKFKGNKNGKIK
Sequences:
>Translated_514_residues MKFTKENIVFLLENVGGSENIEKISHCISRMRFKLVDITKANTEEIKKQK*CKGVLIVGGEYQVVIGTEIESFYKMFLKT TGINENANDELKTKKQKMTFIMFVSSIFSPIMILLVVYGM*EMVRTPFFLSSNSTEIPTLIEINSFMELISKGLS*FIVM AVC*STFRVMGGTPIIGLAIGAILISPMLTPLSALDLDGGKTIIQAMNEHG*KIFGNAVFP*KVSFEGLVIPMIFVGLLG VFIERGMNKVNLGGARMLIQPMVVIAGTVIVTMFTIAPAGLIITNYMSISFNFLMTHNITKYIFSPLIGMLYAPMVVFGL HRTITPILMQDILKFNGSFIMGLMIISNICLAVGCLTFGRLNKNCKEVKNIAYSNGISAFIAGVTEPAIYSISLKYLFPL IASAIGTYFGCLLYTSAGV*TNAAPFGILGIIGFASTIPQGINVEQ*AGGSIV*GTLSVILGISITIFMTIVLSQVKYFK ERTNKILFDEYGFTPELKQKSIFKFKGNKNGKIK >Mature_514_residues MKFTKENIVFLLENVGGSENIEKISHCISRMRFKLVDITKANTEEIKKQK*CKGVLIVGGEYQVVIGTEIESFYKMFLKT TGINENANDELKTKKQKMTFIMFVSSIFSPIMILLVVYGM*EMVRTPFFLSSNSTEIPTLIEINSFMELISKGLS*FIVM AVC*STFRVMGGTPIIGLAIGAILISPMLTPLSALDLDGGKTIIQAMNEHG*KIFGNAVFP*KVSFEGLVIPMIFVGLLG VFIERGMNKVNLGGARMLIQPMVVIAGTVIVTMFTIAPAGLIITNYMSISFNFLMTHNITKYIFSPLIGMLYAPMVVFGL HRTITPILMQDILKFNGSFIMGLMIISNICLAVGCLTFGRLNKNCKEVKNIAYSNGISAFIAGVTEPAIYSISLKYLFPL IASAIGTYFGCLLYTSAGV*TNAAPFGILGIIGFASTIPQGINVEQ*AGGSIV*GTLSVILGISITIFMTIVLSQVKYFK ERTNKILFDEYGFTPELKQKSIFKFKGNKNGKIK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI2367362, Length=448, Percent_Identity=31.4732142857143, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1790159, Length=458, Percent_Identity=23.7991266375546, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI48994906, Length=427, Percent_Identity=23.8875878220141, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011296 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 55138; Mature: 55138
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS51098 PTS_EIIB_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTKENIVFLLENVGGSENIEKISHCISRMRFKLVDITKANTEEIKKQKCKGVLIVGGE CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCEEEEECCC YQVVIGTEIESFYKMFLKTTGINENANDELKTKKQKMTFIMFVSSIFSPIMILLVVYGME EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVRTPFFLSSNSTEIPTLIEINSFMELISKGLSFIVMAVCSTFRVMGGTPIIGLAIGAIL HHCCCEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISPMLTPLSALDLDGGKTIIQAMNEHGKIFGNAVFPKVSFEGLVIPMIFVGLLGVFIERG HHHHHCCHHHHCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC MNKVNLGGARMLIQPMVVIAGTVIVTMFTIAPAGLIITNYMSISFNFLMTHNITKYIFSP CCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHH LIGMLYAPMVVFGLHRTITPILMQDILKFNGSFIMGLMIISNICLAVGCLTFGRLNKNCK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EVKNIAYSNGISAFIAGVTEPAIYSISLKYLFPLIASAIGTYFGCLLYTSAGVTNAAPFG HHHHHHHHCCHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ILGIIGFASTIPQGINVEQAGGSIVGTLSVILGISITIFMTIVLSQVKYFKERTNKILFD HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC EYGFTPELKQKSIFKFKGNKNGKIK CCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MKFTKENIVFLLENVGGSENIEKISHCISRMRFKLVDITKANTEEIKKQKCKGVLIVGGE CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCEEEEECCC YQVVIGTEIESFYKMFLKTTGINENANDELKTKKQKMTFIMFVSSIFSPIMILLVVYGME EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVRTPFFLSSNSTEIPTLIEINSFMELISKGLSFIVMAVCSTFRVMGGTPIIGLAIGAIL HHCCCEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISPMLTPLSALDLDGGKTIIQAMNEHGKIFGNAVFPKVSFEGLVIPMIFVGLLGVFIERG HHHHHCCHHHHCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC MNKVNLGGARMLIQPMVVIAGTVIVTMFTIAPAGLIITNYMSISFNFLMTHNITKYIFSP CCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHH LIGMLYAPMVVFGLHRTITPILMQDILKFNGSFIMGLMIISNICLAVGCLTFGRLNKNCK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EVKNIAYSNGISAFIAGVTEPAIYSISLKYLFPLIASAIGTYFGCLLYTSAGVTNAAPFG HHHHHHHHCCHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ILGIIGFASTIPQGINVEQAGGSIVGTLSVILGISITIFMTIVLSQVKYFKERTNKILFD HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC EYGFTPELKQKSIFKFKGNKNGKIK CCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7608078; 7610040; 9278503 [H]