Definition | Mesoplasma florum L1, complete genome. |
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Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is 50365242
Identifier: 50365242
GI number: 50365242
Start: 497367
End: 498116
Strand: Reverse
Name: 50365242
Synonym: Mfl424
Alternate gene names: NA
Gene position: 498116-497367 (Counterclockwise)
Preceding gene: 50365245
Following gene: 50365241
Centisome position: 62.8
GC content: 23.07
Gene sequence:
>750_bases ATGTTTCAAAGTATAAAAGAAAAGTTAACTGTTATTTATAATAACAACGAGAGTAATACACATAAATTAATTGCTAAATA TTTACTTGATTGTTTGGAAGAAAATAAAACCCCAACTAGTAAAGAATGCTCTGAAGTATGTTTTATTTCTGAATCAGCGT TAACATCATTTTCTAAAAAATATGGTTATAACGGTTTTAGAGAAATAGCTATTAGAATAAAAGTTGAAAGAGAATATTAC AAAGATTTTGAAAAGCAAAAACTTTCTGCCAAGCCATCTACCTTATTTAATCAAGTTGTTCAAAATATAAAACAAATTGA TGTCCAAGAAGATGAAATAAGTTTGTTGGTAAGTTTGTTAAAAGAATGTGGAAGAACATTTTTATTTAGTTCTTATGAAC AGAACTTTAATGTTGAAATCTTTGCAAGTCAATTGCAATATAAAGGTATTGATTCAAACTTTAATTCACAAAGAAAAATG AATCCTATTTGAATAGATTATTGTAAAGAAGACGATTTATGTATATTCTTTGCATTTGGATTAGATAATCAATACTTAGT AAACTATTATAATTTAGTTAAAAATAAAACAAAAAATATTGTAATTGTAACTTCATCATCTCAAAGTCATAAATTTCAAG AATTTAAAGCAGAAATTTTAATATATGAACATAATAGAGAAGATATATATTTATCTATGAGATCTGTAGTTCTTAATTAT TTATTTACAAAAGTAATAATAAAACTTTAA
Upstream 100 bases:
>100_bases CTACACTTATTTTATATAAAAATTTTGCTATTAATTTTACATGTAGTATATTTATAAAGAAGTACTTAAATTTATGAGAA GTACTTTTGGGAGAAAAAAT
Downstream 100 bases:
>100_bases TCAAAAGAAAATGCGCAAGCATTTTTTATTTATTTTTTAAAAAAATGATATTTTAATCTATCTAATTTCAAAACTAAATG ATATTATTTATATATTGTAA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MFQSIKEKLTVIYNNNESNTHKLIAKYLLDCLEENKTPTSKECSEVCFISESALTSFSKKYGYNGFREIAIRIKVEREYY KDFEKQKLSAKPSTLFNQVVQNIKQIDVQEDEISLLVSLLKECGRTFLFSSYEQNFNVEIFASQLQYKGIDSNFNSQRKM NPIWIDYCKEDDLCIFFAFGLDNQYLVNYYNLVKNKTKNIVIVTSSSQSHKFQEFKAEILIYEHNREDIYLSMRSVVLNY LFTKVIIKL
Sequences:
>Translated_249_residues MFQSIKEKLTVIYNNNESNTHKLIAKYLLDCLEENKTPTSKECSEVCFISESALTSFSKKYGYNGFREIAIRIKVEREYY KDFEKQKLSAKPSTLFNQVVQNIKQIDVQEDEISLLVSLLKECGRTFLFSSYEQNFNVEIFASQLQYKGIDSNFNSQRKM NPI*IDYCKEDDLCIFFAFGLDNQYLVNYYNLVKNKTKNIVIVTSSSQSHKFQEFKAEILIYEHNREDIYLSMRSVVLNY LFTKVIIKL >Mature_249_residues MFQSIKEKLTVIYNNNESNTHKLIAKYLLDCLEENKTPTSKECSEVCFISESALTSFSKKYGYNGFREIAIRIKVEREYY KDFEKQKLSAKPSTLFNQVVQNIKQIDVQEDEISLLVSLLKECGRTFLFSSYEQNFNVEIFASQLQYKGIDSNFNSQRKM NPI*IDYCKEDDLCIFFAFGLDNQYLVNYYNLVKNKTKNIVIVTSSSQSHKFQEFKAEILIYEHNREDIYLSMRSVVLNY LFTKVIIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29149; Mature: 29149
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSIKEKLTVIYNNNESNTHKLIAKYLLDCLEENKTPTSKECSEVCFISESALTSFSKK CCCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH YGYNGFREIAIRIKVEREYYKDFEKQKLSAKPSTLFNQVVQNIKQIDVQEDEISLLVSLL HCCCCCEEEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KECGRTFLFSSYEQNFNVEIFASQLQYKGIDSNFNSQRKMNPIIDYCKEDDLCIFFAFGL HHHCHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECC DNQYLVNYYNLVKNKTKNIVIVTSSSQSHKFQEFKAEILIYEHNREDIYLSMRSVVLNYL CCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHH FTKVIIKL HHHHHHCC >Mature Secondary Structure MFQSIKEKLTVIYNNNESNTHKLIAKYLLDCLEENKTPTSKECSEVCFISESALTSFSKK CCCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH YGYNGFREIAIRIKVEREYYKDFEKQKLSAKPSTLFNQVVQNIKQIDVQEDEISLLVSLL HCCCCCEEEEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KECGRTFLFSSYEQNFNVEIFASQLQYKGIDSNFNSQRKMNPIIDYCKEDDLCIFFAFGL HHHCHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECC DNQYLVNYYNLVKNKTKNIVIVTSSSQSHKFQEFKAEILIYEHNREDIYLSMRSVVLNYL CCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHH FTKVIIKL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA