| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is dnaJ [H]
Identifier: 50365232
GI number: 50365232
Start: 484209
End: 485333
Strand: Reverse
Name: dnaJ [H]
Synonym: Mfl414
Alternate gene names: 50365232
Gene position: 485333-484209 (Counterclockwise)
Preceding gene: 50365233
Following gene: 50365231
Centisome position: 61.18
GC content: 31.29
Gene sequence:
>1125_bases ATGGCAAAAAGAGATTATTATGAAGTTTTAGGTGTTTCTAAAACTTCAACAGAACAAGAAATAAAAAGCGCATACAGAAA ACTTGCTAAAAAGTATCACCCCGATATGAATAAAGAGAGCGGTGCTGAAGAAAAATTTAAAGAAGTTAATGAAGCTGCAA GCGTTTTACTTGACGCTGATAAAAAAGCTAAATATGATCAATTTGGTCATGCAGCTTTTGATGGTAGTTCAGGTTTTGGT GGATCAGGCTTTGGTGGATTTGAAGATTTCTTCTCAAACATGGGTGGAGGAATGGACTTTGGTGACATATTCTCTGATTT ATTCGGTGGGGGAAGAAGCGGGCGTTCTTCTAGAAGAGGACCTTCAAAAGGTCAAGACATTGGATTAGAAGCAACACTAA CTTTTAAAGAATTAGTTTTTGGAGTAAATAAAAAAACAATTTTAAATTTAGTTAAAACTTGTACAAAATGTGATGGTGTA GGTGCTGAAAACCCTTCTGATGTTCATATTTGTACAAAATGTAATGGTGCTGGACAAATTATTGTTAATAAACAAATGGG ACCTTTCCAAGTTCAAAACCAAGTTACTTGTGATAAATGTAATGGAGTTGGAAAAGAATTTAAAAGCAAATGTAAAAATT GTCATGGTAAAGGTGTTGAATCTAAAAGAGAAGAAGTTGAAATACCTCTTCCAAAAGGTTTATGACCTGGTCAACAATTT GTTATGCGAGGAAAAGGACATGCATCACTAGAAGGTGGAATTCCAGGTGATCTTTACATAACTATAGGTATTGTGAAAAG CGATGTATTTGAATTGATTCCAAATTCAAATGATTTAATAATGAATTATAATATTTCATACCTTGATGCTATTTTAGGAA ATGAAGTTATCATTAAAACATTAGATGGACCTGTAAGATTAAAAATACCAAAAGGTGTTTATTCTGGTCAACTAATAAAA GTACATGATAAAGGATTATACAAAAATCAAACTTCTGATAAGCGTGGAGATTTATTAATTAAAATAAGTATTTCTATTCC AACATCAGTTTCTAAAGAAGAGAAAAAAATACTTAAAGAGTTAGAACAACTTTCTAATTTTGAGCCTAAAAATATTATTG ATTAA
Upstream 100 bases:
>100_bases TGCTCAACCTGAAGAAGGAAATTCAGATTCAGAAGAAAACAAATAAACCAAATTTAAAAACTAACAATTGTTAGTTTTAT TTTTTAAAAAGGAAAAGAAC
Downstream 100 bases:
>100_bases AACTAACTTAAAATAAAAGTTAGTTTTTTTTATTTGAATATTGACTATTTTTTATATAAAATCGTTAAGTATAAAATTAA TATGAAAACTTGTATAATCC
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MAKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKAKYDQFGHAAFDGSSGFG GSGFGGFEDFFSNMGGGMDFGDIFSDLFGGGRSGRSSRRGPSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGV GAENPSDVHICTKCNGAGQIIVNKQMGPFQVQNQVTCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGLWPGQQF VMRGKGHASLEGGIPGDLYITIGIVKSDVFELIPNSNDLIMNYNISYLDAILGNEVIIKTLDGPVRLKIPKGVYSGQLIK VHDKGLYKNQTSDKRGDLLIKISISIPTSVSKEEKKILKELEQLSNFEPKNIID
Sequences:
>Translated_374_residues MAKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKAKYDQFGHAAFDGSSGFG GSGFGGFEDFFSNMGGGMDFGDIFSDLFGGGRSGRSSRRGPSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGV GAENPSDVHICTKCNGAGQIIVNKQMGPFQVQNQVTCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGL*PGQQF VMRGKGHASLEGGIPGDLYITIGIVKSDVFELIPNSNDLIMNYNISYLDAILGNEVIIKTLDGPVRLKIPKGVYSGQLIK VHDKGLYKNQTSDKRGDLLIKISISIPTSVSKEEKKILKELEQLSNFEPKNIID >Mature_373_residues AKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKAKYDQFGHAAFDGSSGFGG SGFGGFEDFFSNMGGGMDFGDIFSDLFGGGRSGRSSRRGPSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGVG AENPSDVHICTKCNGAGQIIVNKQMGPFQVQNQVTCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGL*PGQQFV MRGKGHASLEGGIPGDLYITIGIVKSDVFELIPNSNDLIMNYNISYLDAILGNEVIIKTLDGPVRLKIPKGVYSGQLIKV HDKGLYKNQTSDKRGDLLIKISISIPTSVSKEEKKILKELEQLSNFEPKNIID
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360840, Length=369, Percent_Identity=32.7913279132791, Blast_Score=171, Evalue=9e-43, Organism=Homo sapiens, GI205360838, Length=369, Percent_Identity=32.7913279132791, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI194328758, Length=369, Percent_Identity=33.8753387533875, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI194328760, Length=369, Percent_Identity=33.8753387533875, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI4504511, Length=353, Percent_Identity=32.8611898016997, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI5031741, Length=381, Percent_Identity=33.0708661417323, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI7706495, Length=373, Percent_Identity=30.2949061662198, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI194328762, Length=333, Percent_Identity=30.9309309309309, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI5453690, Length=363, Percent_Identity=29.4765840220386, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI6631085, Length=396, Percent_Identity=28.030303030303, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI56549115, Length=371, Percent_Identity=27.2237196765499, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI201862518, Length=371, Percent_Identity=27.2237196765499, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI201862587, Length=371, Percent_Identity=27.2237196765499, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI9558755, Length=121, Percent_Identity=42.9752066115703, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI47777312, Length=108, Percent_Identity=46.2962962962963, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI194306642, Length=108, Percent_Identity=41.6666666666667, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI194306640, Length=108, Percent_Identity=41.6666666666667, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI22749377, Length=107, Percent_Identity=36.4485981308411, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI56687498, Length=67, Percent_Identity=49.2537313432836, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI39204547, Length=162, Percent_Identity=32.7160493827161, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI17388799, Length=107, Percent_Identity=44.8598130841121, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI27151736, Length=120, Percent_Identity=38.3333333333333, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4885495, Length=107, Percent_Identity=44.8598130841121, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI88501736, Length=120, Percent_Identity=38.3333333333333, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI23503241, Length=111, Percent_Identity=40.5405405405405, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI72534740, Length=126, Percent_Identity=36.5079365079365, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI21553335, Length=82, Percent_Identity=47.5609756097561, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI29126218, Length=82, Percent_Identity=41.4634146341463, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI45504382, Length=82, Percent_Identity=42.6829268292683, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI68077168, Length=78, Percent_Identity=46.1538461538462, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI68077166, Length=78, Percent_Identity=46.1538461538462, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI24308127, Length=76, Percent_Identity=42.1052631578947, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1786197, Length=364, Percent_Identity=37.6373626373626, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1787235, Length=372, Percent_Identity=29.3010752688172, Blast_Score=129, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17507263, Length=361, Percent_Identity=32.6869806094183, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553096, Length=365, Percent_Identity=30.6849315068493, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553098, Length=365, Percent_Identity=30.6849315068493, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI212645553, Length=375, Percent_Identity=30.1333333333333, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17534355, Length=66, Percent_Identity=66.6666666666667, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17554644, Length=109, Percent_Identity=45.8715596330275, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538236, Length=121, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115532476, Length=77, Percent_Identity=45.4545454545455, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115532378, Length=93, Percent_Identity=38.7096774193548, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17568643, Length=76, Percent_Identity=46.0526315789474, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=367, Percent_Identity=36.5122615803815, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6323870, Length=370, Percent_Identity=33.7837837837838, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323119, Length=388, Percent_Identity=30.9278350515464, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321094, Length=401, Percent_Identity=33.9152119700748, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6324252, Length=423, Percent_Identity=26.9503546099291, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6323813, Length=137, Percent_Identity=43.0656934306569, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6324321, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322194, Length=95, Percent_Identity=41.0526315789474, Blast_Score=66, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322388, Length=113, Percent_Identity=35.3982300884956, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI45552811, Length=377, Percent_Identity=31.8302387267904, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI45549272, Length=377, Percent_Identity=31.8302387267904, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI45552813, Length=377, Percent_Identity=31.8302387267904, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24646562, Length=361, Percent_Identity=31.8559556786704, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646560, Length=361, Percent_Identity=31.8559556786704, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646558, Length=361, Percent_Identity=31.8559556786704, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646556, Length=361, Percent_Identity=31.8559556786704, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI21357547, Length=361, Percent_Identity=31.8559556786704, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI20129487, Length=355, Percent_Identity=30.1408450704225, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24584014, Length=355, Percent_Identity=30.1408450704225, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI28574949, Length=375, Percent_Identity=24.5333333333333, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI19920464, Length=367, Percent_Identity=29.1553133514986, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI85726398, Length=381, Percent_Identity=26.509186351706, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI18858081, Length=403, Percent_Identity=25.0620347394541, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21358273, Length=66, Percent_Identity=60.6060606060606, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24658562, Length=131, Percent_Identity=36.6412213740458, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24658555, Length=131, Percent_Identity=36.6412213740458, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24586131, Length=137, Percent_Identity=34.3065693430657, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24668523, Length=82, Percent_Identity=45.1219512195122, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI17737735, Length=75, Percent_Identity=49.3333333333333, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574723, Length=82, Percent_Identity=45.1219512195122, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24668492, Length=66, Percent_Identity=43.9393939393939, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17648033, Length=101, Percent_Identity=40.5940594059406, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584630, Length=101, Percent_Identity=40.5940594059406, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641698, Length=62, Percent_Identity=46.7741935483871, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24641696, Length=62, Percent_Identity=46.7741935483871, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=50, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI21355911, Length=94, Percent_Identity=40.4255319148936, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 40669; Mature: 40538
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDAD CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC KKAKYDQFGHAAFDGSSGFGGSGFGGFEDFFSNMGGGMDFGDIFSDLFGGGRSGRSSRRG CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC PSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGVGAENPSDVHICTKCNGAGQI CCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEE IVNKQMGPFQVQNQVTCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGLPGQQFV EEECCCCCEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCHHCEECCCCCCCCCHHHE MRGKGHASLEGGIPGDLYITIGIVKSDVFELIPNSNDLIMNYNISYLDAILGNEVIIKTL EECCCCCEECCCCCCCEEEEEEEHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEEEEEC DGPVRLKIPKGVYSGQLIKVHDKGLYKNQTSDKRGDLLIKISISIPTSVSKEEKKILKEL CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH EQLSNFEPKNIID HHHHCCCCCCCCC >Mature Secondary Structure AKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDAD CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC KKAKYDQFGHAAFDGSSGFGGSGFGGFEDFFSNMGGGMDFGDIFSDLFGGGRSGRSSRRG CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC PSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGVGAENPSDVHICTKCNGAGQI CCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEE IVNKQMGPFQVQNQVTCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGLPGQQFV EEECCCCCEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCHHCEECCCCCCCCCHHHE MRGKGHASLEGGIPGDLYITIGIVKSDVFELIPNSNDLIMNYNISYLDAILGNEVIIKTL EECCCCCEECCCCCCCEEEEEEEHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEEEEEC DGPVRLKIPKGVYSGQLIKVHDKGLYKNQTSDKRGDLLIKISISIPTSVSKEEKKILKEL CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH EQLSNFEPKNIID HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA