| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 50365102
GI number: 50365102
Start: 327675
End: 328730
Strand: Direct
Name: cdsA [H]
Synonym: Mfl286
Alternate gene names: 50365102
Gene position: 327675-328730 (Clockwise)
Preceding gene: 50365101
Following gene: 50365103
Centisome position: 41.31
GC content: 23.77
Gene sequence:
>1056_bases ATGACTAATAAAATAGAATCCAATCAAAGTAAATTTTTAAATTTAAAAAATAATAATTTCTTTATAAGATTTTCATCAAG TGTAATTATAGTTGCTATGATAATTTTATTTTTATCAACAGCAATATTGAGTGAAGAATTATGAGTTCATTTAAGCGATA AAAATAAAGCAGAAGCTGTTAGTCAAGCTCTTGGAATTGTTATGCTATGCATATCTGTTGCTATATTAATGTTTTGTATA TATGAATTATCTACATCATTAAAGATTAAAAATAAAGTTTTCATAATAATTATGGAATTATTAGCTTTGGGACTATTTTT AGCACCGATAACTTCAATAAGAAATCTAAATGATTTATTCATTTACCAAGATTGAGTTTTAAAAGCTAAACTGGCTGAAT GATATATGCAATTTATTTATTTAATTATATTTTTAAGTGCTTCAACAATAACAGGTTATTTATCAGGAGTTAATCTTAAA AAAATGGTTATGATCATTGGAACTTCATTAATTATAATATTTGGTATGAAAGGATTTACTTACATATCACTAACAAATGA TTATAATTCACAAGATTATTCAAGTATTAGATTTGGTTATGTAACAGCAATTTGAATTTGATTAATTGTTATATTAACAG ATACATTTGCTTATATATTTGGTATAGCATTTGGTAAACACAAAATGGCTCCAAAAATTTCCCCTAAAAAAAGTTGAGAA GGTGCAATCGGAGGATTTACAACAGCTTTTATAGTTTCAGTAACAATGGCAATATTATTTTTCTTCTTTGTTAATTCTCA TTCTATTTTTAAAGATTATATGAGTAATATTCAAACCAATTTAGGAACAGGATTAGTTATATTCATGTATATTCTTTTAG CATCTTTAATTTCATTTATAGGTCAATTAGGAGATTTGTTTTTTTCACTAATTAAAAGAAAAAATGATATAAAAGATTTT TCAAATTTAATACCAGGCCATGGAGGAGTTTTAGATAGACTTGACTCATTCATGTTAGTATTCTTATTTATGTATTTATT TACATTAATCAATTAG
Upstream 100 bases:
>100_bases AAATAAAAAAAATAATAAAAAATAACCTGTGTTTAAGGGTTAAAAAACAATGCAAAATTTGCTAAAATTAATATAATTGT ATTTTAAAGAAAGGATCATT
Downstream 100 bases:
>100_bases TTTAAGGAGTTTATATGGGAAGTGTAATGATAGTAATTTTATCAATATTAATTTCAATCATTGTTGTATTGGTGCTAATT ACACTTCATGAACTAGGACA
Product: CDP-diglyceride synthetase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTNKIESNQSKFLNLKNNNFFIRFSSSVIIVAMIILFLSTAILSEELWVHLSDKNKAEAVSQALGIVMLCISVAILMFCI YELSTSLKIKNKVFIIIMELLALGLFLAPITSIRNLNDLFIYQDWVLKAKLAEWYMQFIYLIIFLSASTITGYLSGVNLK KMVMIIGTSLIIIFGMKGFTYISLTNDYNSQDYSSIRFGYVTAIWIWLIVILTDTFAYIFGIAFGKHKMAPKISPKKSWE GAIGGFTTAFIVSVTMAILFFFFVNSHSIFKDYMSNIQTNLGTGLVIFMYILLASLISFIGQLGDLFFSLIKRKNDIKDF SNLIPGHGGVLDRLDSFMLVFLFMYLFTLIN
Sequences:
>Translated_351_residues MTNKIESNQSKFLNLKNNNFFIRFSSSVIIVAMIILFLSTAILSEEL*VHLSDKNKAEAVSQALGIVMLCISVAILMFCI YELSTSLKIKNKVFIIIMELLALGLFLAPITSIRNLNDLFIYQD*VLKAKLAE*YMQFIYLIIFLSASTITGYLSGVNLK KMVMIIGTSLIIIFGMKGFTYISLTNDYNSQDYSSIRFGYVTAI*I*LIVILTDTFAYIFGIAFGKHKMAPKISPKKS*E GAIGGFTTAFIVSVTMAILFFFFVNSHSIFKDYMSNIQTNLGTGLVIFMYILLASLISFIGQLGDLFFSLIKRKNDIKDF SNLIPGHGGVLDRLDSFMLVFLFMYLFTLIN >Mature_350_residues TNKIESNQSKFLNLKNNNFFIRFSSSVIIVAMIILFLSTAILSEEL*VHLSDKNKAEAVSQALGIVMLCISVAILMFCIY ELSTSLKIKNKVFIIIMELLALGLFLAPITSIRNLNDLFIYQD*VLKAKLAE*YMQFIYLIIFLSASTITGYLSGVNLKK MVMIIGTSLIIIFGMKGFTYISLTNDYNSQDYSSIRFGYVTAI*I*LIVILTDTFAYIFGIAFGKHKMAPKISPKKS*EG AIGGFTTAFIVSVTMAILFFFFVNSHSIFKDYMSNIQTNLGTGLVIFMYILLASLISFIGQLGDLFFSLIKRKNDIKDFS NLIPGHGGVLDRLDSFMLVFLFMYLFTLIN
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=222, Percent_Identity=31.5315315315315, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1787677, Length=125, Percent_Identity=34.4, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17539016, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17539014, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319503, Length=156, Percent_Identity=31.4102564102564, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 38599; Mature: 38468
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKIESNQSKFLNLKNNNFFIRFSSSVIIVAMIILFLSTAILSEELVHLSDKNKAEAVS CCCCCCCCHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QALGIVMLCISVAILMFCIYELSTSLKIKNKVFIIIMELLALGLFLAPITSIRNLNDLFI HHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YQDVLKAKLAEYMQFIYLIIFLSASTITGYLSGVNLKKMVMIIGTSLIIIFGMKGFTYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LTNDYNSQDYSSIRFGYVTAIILIVILTDTFAYIFGIAFGKHKMAPKISPKKSEGAIGGF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH TTAFIVSVTMAILFFFFVNSHSIFKDYMSNIQTNLGTGLVIFMYILLASLISFIGQLGDL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FFSLIKRKNDIKDFSNLIPGHGGVLDRLDSFMLVFLFMYLFTLIN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNKIESNQSKFLNLKNNNFFIRFSSSVIIVAMIILFLSTAILSEELVHLSDKNKAEAVS CCCCCCCHHHEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QALGIVMLCISVAILMFCIYELSTSLKIKNKVFIIIMELLALGLFLAPITSIRNLNDLFI HHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YQDVLKAKLAEYMQFIYLIIFLSASTITGYLSGVNLKKMVMIIGTSLIIIFGMKGFTYIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LTNDYNSQDYSSIRFGYVTAIILIVILTDTFAYIFGIAFGKHKMAPKISPKKSEGAIGGF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH TTAFIVSVTMAILFFFFVNSHSIFKDYMSNIQTNLGTGLVIFMYILLASLISFIGQLGDL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FFSLIKRKNDIKDFSNLIPGHGGVLDRLDSFMLVFLFMYLFTLIN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA