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The map label for this gene is yycI [H]

Identifier: 49188300

GI number: 49188300

Start: 5202954

End: 5203796

Strand: Reverse

Name: yycI [H]

Synonym: BAS5316

Alternate gene names: 49188300

Gene position: 5203796-5202954 (Counterclockwise)

Preceding gene: 49188301

Following gene: 49188299

Centisome position: 99.52

GC content: 32.15

Gene sequence:

>843_bases
ATGGATTGGGATCGGATTAAAACCATATTTATTGTGACCTTTTTTGTTTTGGATCTCTTTCTCATTTTTCAATTCATTCA
AAAGCAAGATAGTAATCAATTGGAGCTTATTGCAGAAACAAAGATAGATCAAGAATTAAAAGCAAACAAAATTACTATGG
GTAATTTCCCTAAAGAACCGAAAAAAGAGTCATTTATTAGGGCTGAAAACAAGGCATTTAAAGAAGAAGATGTACAGGCT
TTAAAAAATCAAACGGCGCATATACAAAATATGTACAAAATAGAAAGTAAGCTAAAAGAGCCCTTTTTAAATACAAAATC
TTTATCCAAAGATAAGTATAATGATTTTTTGAAGAACTATGTATTAGATGGACAAAAGTATGAGTTTGGAGCGATGAAAG
ACTCTAAAATTTACTTCTTCCAAAGATATAAAGATAAGCCTATTTTCTATAACGAGCAGGCAATGATTGTTGTGGAACTA
AATGAAAAAAATGAACTTGTGTCGTACACACAGACGATGCTAACAGATTTAAAAGAAATGGGCGAAAGTGAAAAAACGAA
ACAGCAAGAAATTATTACTGCCCAAACTGCTTTAGAAAATCTGTATTTAAAAAATAAAATTCATGGGAATACACATGTAA
AAGAAGCGCAAATTGGTTATGCCAACCTTACCGCATCTACTTCTAATAACCAAGTACTTGCTTCAACGTGGAATTTAAAA
ACGGAGCAGAAGCAGGACTTCTTTGTAAATGCAATTGAAGGACAAGTTATGGAATTAGGTGAAAAGGAAAATCAAGTGGT
TGATGAACATACTGGAGTGAGAAAGAATGGGGTTGCATTTTAG

Upstream 100 bases:

>100_bases
GATGGGCAAGTAGCGCGACTACAGCCGATTTGGTATGTAAAGTTTGTTGAAGATGAAGCTGGCAAACAAAAAATATATGA
GTGGAGTGAGGGAGGACTAA

Downstream 100 bases:

>100_bases
TGTACTTGCAAGTGGAAGTACAGGGAATATGCTATATGTAGGAACAGATGAAAAAAAATTACTCGTCGATGCAGGTTTAA
GCGGTAAAGCAACTGAGGCT

Product: yycI protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMGNFPKEPKKESFIRAENKAFKEEDVQA
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQRYKDKPIFYNEQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLASTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF

Sequences:

>Translated_280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMGNFPKEPKKESFIRAENKAFKEEDVQA
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQRYKDKPIFYNEQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLASTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
>Mature_280_residues
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMGNFPKEPKKESFIRAENKAFKEEDVQA
LKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNYVLDGQKYEFGAMKDSKIYFFQRYKDKPIFYNEQAMIVVEL
NEKNELVSYTQTMLTDLKEMGESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLASTWNLK
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 32665; Mature: 32665

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMGNFPKEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHCCCEEECCCCCCC
KKESFIRAENKAFKEEDVQALKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
VLDGQKYEFGAMKDSKIYFFQRYKDKPIFYNEQAMIVVELNEKNELVSYTQTMLTDLKEM
HCCCCCEECCCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHH
GESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLASTWNLK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDWDRIKTIFIVTFFVLDLFLIFQFIQKQDSNQLELIAETKIDQELKANKITMGNFPKEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHCCCEEECCCCCCC
KKESFIRAENKAFKEEDVQALKNQTAHIQNMYKIESKLKEPFLNTKSLSKDKYNDFLKNY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
VLDGQKYEFGAMKDSKIYFFQRYKDKPIFYNEQAMIVVELNEKNELVSYTQTMLTDLKEM
HCCCCCEECCCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHH
GESEKTKQQEIITAQTALENLYLKNKIHGNTHVKEAQIGYANLTASTSNNQVLASTWNLK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
TEQKQDFFVNAIEGQVMELGEKENQVVDEHTGVRKNGVAF
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]