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The map label for this gene is yycJ [H]

Identifier: 49188299

GI number: 49188299

Start: 5202176

End: 5202970

Strand: Reverse

Name: yycJ [H]

Synonym: BAS5315

Alternate gene names: 49188299

Gene position: 5202970-5202176 (Counterclockwise)

Preceding gene: 49188300

Following gene: 49188298

Centisome position: 99.51

GC content: 37.11

Gene sequence:

>795_bases
ATGGGGTTGCATTTTAGTGTACTTGCAAGTGGAAGTACAGGGAATATGCTATATGTAGGAACAGATGAAAAAAAATTACT
CGTCGATGCAGGTTTAAGCGGTAAAGCAACTGAGGCTTTATTTAAACAAGCAGAATTAAATATAAATGATGTATCGGGTA
TTCTTGTAACGCATGAACATAGTGACCATATTAAAGGATTAGGTGTATTGGCACGTAAATATGATTTGCCGGTTTATGCA
AATGAGAAAACATGGAATGCAATGGAACACTTAATAGGAAATATCCCAACTGACCAAAAGTTTATTTTCTCAGTTGGGGA
TGTAAAAACCTTCGGTGATATTGAGGTCGAGTCATTTGGTGTTTCACATGATGCGGCAGAGCCGATGTTCTATGCTTTTC
ATAACAATAATAGAAAGCTAGCTCTTATTACAGATACGGGATACGTGAGTGACCGTATGAAAGGTGTTATTAAGGGGGCT
AATGCTTTCGTGTTTGAAAGTAATCATGACGTGGAAATGCTTCGTATGGGACGTTATCCATGGAGTATTAAACGACGTAT
TTTAAGTGATGTGGGGCACGTTTGTAATGAAGATGCTGCATTAGCAATGGCGGATGTAATTACAGATGAGACAAAGCATA
TTTATTTAGCCCATTTGAGTTTAGATAATAACATGAAAGAACTAGCACGTATGTCGGTATCACAAGTATTAGAGGAAAAG
GGATTTGGAGTGGGAGAAGCTTTTGAAATTCACGATACAGATCCAAAAATGCCTACAAAAATTCAATACGTATAA

Upstream 100 bases:

>100_bases
CAGAAGCAGGACTTCTTTGTAAATGCAATTGAAGGACAAGTTATGGAATTAGGTGAAAAGGAAAATCAAGTGGTTGATGA
ACATACTGGAGTGAGAAAGA

Downstream 100 bases:

>100_bases
TTCTCCATTTTAGTAAACAATAAAGGTGAATATAGTTGTTTTCAGGAAGATAGGTGAACAAATATGTCCTTTATTGATGG
AGAAAATTATCGTATGAAAC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MGLHFSVLASGSTGNMLYVGTDEKKLLVDAGLSGKATEALFKQAELNINDVSGILVTHEHSDHIKGLGVLARKYDLPVYA
NEKTWNAMEHLIGNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGA
NAFVFESNHDVEMLRMGRYPWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQVLEEK
GFGVGEAFEIHDTDPKMPTKIQYV

Sequences:

>Translated_264_residues
MGLHFSVLASGSTGNMLYVGTDEKKLLVDAGLSGKATEALFKQAELNINDVSGILVTHEHSDHIKGLGVLARKYDLPVYA
NEKTWNAMEHLIGNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGA
NAFVFESNHDVEMLRMGRYPWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQVLEEK
GFGVGEAFEIHDTDPKMPTKIQYV
>Mature_263_residues
GLHFSVLASGSTGNMLYVGTDEKKLLVDAGLSGKATEALFKQAELNINDVSGILVTHEHSDHIKGLGVLARKYDLPVYAN
EKTWNAMEHLIGNIPTDQKFIFSVGDVKTFGDIEVESFGVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGAN
AFVFESNHDVEMLRMGRYPWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQVLEEKG
FGVGEAFEIHDTDPKMPTKIQYV

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 29294; Mature: 29162

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLHFSVLASGSTGNMLYVGTDEKKLLVDAGLSGKATEALFKQAELNINDVSGILVTHEH
CCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEECCCEEEEEECC
SDHIKGLGVLARKYDLPVYANEKTWNAMEHLIGNIPTDQKFIFSVGDVKTFGDIEVESFG
CCCHHHHHHHHEEECCCEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEC
VSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRYP
CCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEEEECCCC
WSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQVLEEK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHC
GFGVGEAFEIHDTDPKMPTKIQYV
CCCCCCEEEEECCCCCCCCEEEEC
>Mature Secondary Structure 
GLHFSVLASGSTGNMLYVGTDEKKLLVDAGLSGKATEALFKQAELNINDVSGILVTHEH
CEEEEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCEECCCEEEEEECC
SDHIKGLGVLARKYDLPVYANEKTWNAMEHLIGNIPTDQKFIFSVGDVKTFGDIEVESFG
CCCHHHHHHHHEEECCCEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEC
VSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRYP
CCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEEEECCCC
WSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQVLEEK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHC
GFGVGEAFEIHDTDPKMPTKIQYV
CCCCCCEEEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]