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The map label for this gene is yibD [C]

Identifier: 49188265

GI number: 49188265

Start: 5164679

End: 5165500

Strand: Direct

Name: yibD [C]

Synonym: BAS5280

Alternate gene names: 49188265

Gene position: 5164679-5165500 (Clockwise)

Preceding gene: 49188264

Following gene: 49188266

Centisome position: 98.78

GC content: 33.33

Gene sequence:

>822_bases
TTGAAATTTTCTTTAATCATGGCTACTTGTGGCAGACGTGATGATATTCTTGACTTACTAAAATCACTTGAACAACAAAC
TTACAAAAACTTTGAACTTATCGTAGTAGATCAAAATGATACGCCAATCTCTGATTTATTTGATGAATATAAAGATAAAT
TTTCTATTAATTACATTTATACACCTATTAAAGGACTATCAAGAGCTCGCAATGCGGGCTTAAAAGTAGCAGATGGCGAT
TTTATCGCTTTTCCAGATGATGATTGTATTTATGAAAAGAATGTTTTAGAGAGTATATTAGAAACTTTCAACTCTAATAA
AGATGTGCATTTCATCTCAACAAACACGACAAATGTTGAAGGAACTGGTTCTTTAATACACGCACCGAATACAGACATTA
TTTTAAATAATAAATATGGATTCATGGGGCCTTCTTTCACCCTATTCTTCACAAAGCAATTTGTACAAGATGTAGGTACA
TTTGATGAAGATTTAGGTGTTGGTTCTGGAACGATTTATGGAGCCGGTGAAGAAACTGACTTTGTGTTACGCGGTATGAA
ACAAAATTATACTGGTCTATTTAGAAAAGATCTGTTCGTATACCATCCTGTAAAAGAGGAAATTATTAATGAACAATCAT
TAAAACGTGCCATTTCTTATGCTGGTGGTTTTGGTAGAATTATTCGCTTACACTATGGATTCCCTTATTTCTTGCGTGCT
GTCGCTGCTGCAACATTCCGTATGACACAAAATATTTCTAATGATAAACGCAAATTCCATGCAAATCGCTTACGCGGAAT
TGTTCGTGGATATTTAAAATAA

Upstream 100 bases:

>100_bases
CTCTTTATAACAAAGGATGAAATTCTCTTTTCGCTACTTGAAAAGATACTAGCACGATTCAAAAAGGCTTAAACGCAATC
TCTAAAAGGAGCTGTTAAAC

Downstream 100 bases:

>100_bases
AAAATAAGGTGTAACCACTTATATAAAATGGTTATACCTTATTTTTATTTCTCTCACATCACAGCAATCCATCATCCTTT
TGTCATCGTATACCCTACTA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Protein; WecB/TagA/CpsF Family Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKFSLIMATCGRRDDILDLLKSLEQQTYKNFELIVVDQNDTPISDLFDEYKDKFSINYIYTPIKGLSRARNAGLKVADGD
FIAFPDDDCIYEKNVLESILETFNSNKDVHFISTNTTNVEGTGSLIHAPNTDIILNNKYGFMGPSFTLFFTKQFVQDVGT
FDEDLGVGSGTIYGAGEETDFVLRGMKQNYTGLFRKDLFVYHPVKEEIINEQSLKRAISYAGGFGRIIRLHYGFPYFLRA
VAAATFRMTQNISNDKRKFHANRLRGIVRGYLK

Sequences:

>Translated_273_residues
MKFSLIMATCGRRDDILDLLKSLEQQTYKNFELIVVDQNDTPISDLFDEYKDKFSINYIYTPIKGLSRARNAGLKVADGD
FIAFPDDDCIYEKNVLESILETFNSNKDVHFISTNTTNVEGTGSLIHAPNTDIILNNKYGFMGPSFTLFFTKQFVQDVGT
FDEDLGVGSGTIYGAGEETDFVLRGMKQNYTGLFRKDLFVYHPVKEEIINEQSLKRAISYAGGFGRIIRLHYGFPYFLRA
VAAATFRMTQNISNDKRKFHANRLRGIVRGYLK
>Mature_273_residues
MKFSLIMATCGRRDDILDLLKSLEQQTYKNFELIVVDQNDTPISDLFDEYKDKFSINYIYTPIKGLSRARNAGLKVADGD
FIAFPDDDCIYEKNVLESILETFNSNKDVHFISTNTTNVEGTGSLIHAPNTDIILNNKYGFMGPSFTLFFTKQFVQDVGT
FDEDLGVGSGTIYGAGEETDFVLRGMKQNYTGLFRKDLFVYHPVKEEIINEQSLKRAISYAGGFGRIIRLHYGFPYFLRA
VAAATFRMTQNISNDKRKFHANRLRGIVRGYLK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31085; Mature: 31085

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSLIMATCGRRDDILDLLKSLEQQTYKNFELIVVDQNDTPISDLFDEYKDKFSINYIY
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHEEEEEEE
TPIKGLSRARNAGLKVADGDFIAFPDDDCIYEKNVLESILETFNSNKDVHFISTNTTNVE
CCHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
GTGSLIHAPNTDIILNNKYGFMGPSFTLFFTKQFVQDVGTFDEDLGVGSGTIYGAGEETD
CCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHH
FVLRGMKQNYTGLFRKDLFVYHPVKEEIINEQSLKRAISYAGGFGRIIRLHYGFPYFLRA
HHHHCHHHCCCHHHHHCEEEECCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
VAAATFRMTQNISNDKRKFHANRLRGIVRGYLK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFSLIMATCGRRDDILDLLKSLEQQTYKNFELIVVDQNDTPISDLFDEYKDKFSINYIY
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHEEEEEEE
TPIKGLSRARNAGLKVADGDFIAFPDDDCIYEKNVLESILETFNSNKDVHFISTNTTNVE
CCHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
GTGSLIHAPNTDIILNNKYGFMGPSFTLFFTKQFVQDVGTFDEDLGVGSGTIYGAGEETD
CCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCHH
FVLRGMKQNYTGLFRKDLFVYHPVKEEIINEQSLKRAISYAGGFGRIIRLHYGFPYFLRA
HHHHCHHHCCCHHHHHCEEEECCHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
VAAATFRMTQNISNDKRKFHANRLRGIVRGYLK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA