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The map label for this gene is yfmM [H]

Identifier: 49188266

GI number: 49188266

Start: 5165696

End: 5167249

Strand: Direct

Name: yfmM [H]

Synonym: BAS5281

Alternate gene names: 49188266

Gene position: 5165696-5167249 (Clockwise)

Preceding gene: 49188265

Following gene: 49188267

Centisome position: 98.8

GC content: 36.81

Gene sequence:

>1554_bases
ATGAGCTTATTAACTGTTGAAAAATTAGGCCATACATTTGGTGATCGTACATTATTTAAAGATGTATCCATGCGCTTACT
TGCAGGAGAACACGTTGGATTAGTTGGAGCAAACGGTGTTGGTAAATCAACATTTATGAATATAATTACTGGTCAGCTTA
TCCATGACGAAGGTCGCGTTGAATGGACACCTGGTACGAATTACGGTTACTTAGACCAGCATACTATTTTAACACCTGGT
CGCACAATTCGTGATGTATTAGCAGATGCGTTTTTACCTTTATTTGAAAAAGAAAAAGCTTTAAATGAAGTTACAGAGAA
AATGGGAACTGCTACACCAGAAGAATTGGAGGAACTTCTTGAGCAAATGGCAGAAATTCAAGATGCTCTTGAAGCAGGTG
GCTTCTATTTATTAGATATTAAAATTGAAGAAGCAGCGCGTGGTCTTGGAATTGACGCAATTGGGCTAGATCGTGATGTT
GTGGCATTAAGTGGTGGACAACGTACAAAAGTATTACTTGCAAAGTTACTACTTGAGCAACCAGAAGTACTACTATTAGA
TGAGCCTACCAACTATTTAGACGTTGAACATATTCATTGGTTAACAAATTATTTAAAAGAGTATCCACATGCGTTCCTAT
TGATTTCCCATGATACGGAATTTATGAATAAATGTGTTGATGTTATTTTCCATCTAGAATTCACAAAAATGACGCGTTAC
ACAGCAACATATGAAAAATTCTTAGAGCTAGCAGAAATCAATAAAAATCAACATATCAACGCCTATGAAAAGCAGAGAGA
ATTTATTAAAAAGCAAGAAGACTTTATCGCCAAAAATAAAGCTCGTTACTCAACGACTGGCCGTGCAAAGAGCCGTCAAA
AACAACTTGATCGTATGGAGCGTATTGATCGTCCTGAAACAGCTATTAAGCCTGAGTTCTCCTTTAAAGAAAGTCGTGCA
AGTAGTCGATTTGTCTTTGAAGGGGAAAATGTAGAGATCGGGTATACACATCCGTTATTACCGAAATTAACAATGACAAT
TGAACGTGGCGAAAAAATTGCAATTGTTGGATGTAACGGTGTCGGTAAATCAACACTGTTAAAAACAATTTTAGGTAAGA
TTAAACCATTAAGCGGAAAGACAAGTCTTGGTGACTTCTTAAATCCATCATACTTCGAGCAGGAAGTAAAAGCTGATAAT
ATAACACCAATTGATGATGTTTGGAATACATTCCCTAGCTTAGACCAACATCAAATCCGTGCAATGTTAGCAAAATGCGG
TTTAAAGAATGAACATATCTCTCGTCCACTGAATCAATTAAGTGGTGGCGAACAAGCAAAAGTTCGTTTATGTAAACTAA
TGGGTGAAGAAAGTAACTGGTTACTCTTTGATGAGCCAACAAACCACCTTGATGTTACAGCAAAAGAAGAGCTGAAAAAG
GCGATGAAAGCATACAAAGGAACAATTCTTCTTGTATGCCACGAACCTGATTTTTATGAAGATTGGGTAACAAAAACTTG
GGATGTAGAGAAATGGGCCCAAGAAAATTCTTAA

Upstream 100 bases:

>100_bases
TACTATTCAATTACATTATATATTTTGGAAATGATAGCATTCTACCCAAGAATTTAGTATCATGATTCAAGACACTATTT
AGAAATGAACGGAGGACATT

Downstream 100 bases:

>100_bases
TCCCCTAAAAACATCCCTTTACACTGATATTTAATGTGTAAAGGGATTTCATTTTAAAATAACCATGCAATTTGACAAGG
AGTTTTTAATAATGCAACAC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSLLTVEKLGHTFGDRTLFKDVSMRLLAGEHVGLVGANGVGKSTFMNIITGQLIHDEGRVEWTPGTNYGYLDQHTILTPG
RTIRDVLADAFLPLFEKEKALNEVTEKMGTATPEELEELLEQMAEIQDALEAGGFYLLDIKIEEAARGLGIDAIGLDRDV
VALSGGQRTKVLLAKLLLEQPEVLLLDEPTNYLDVEHIHWLTNYLKEYPHAFLLISHDTEFMNKCVDVIFHLEFTKMTRY
TATYEKFLELAEINKNQHINAYEKQREFIKKQEDFIAKNKARYSTTGRAKSRQKQLDRMERIDRPETAIKPEFSFKESRA
SSRFVFEGENVEIGYTHPLLPKLTMTIERGEKIAIVGCNGVGKSTLLKTILGKIKPLSGKTSLGDFLNPSYFEQEVKADN
ITPIDDVWNTFPSLDQHQIRAMLAKCGLKNEHISRPLNQLSGGEQAKVRLCKLMGEESNWLLFDEPTNHLDVTAKEELKK
AMKAYKGTILLVCHEPDFYEDWVTKTWDVEKWAQENS

Sequences:

>Translated_517_residues
MSLLTVEKLGHTFGDRTLFKDVSMRLLAGEHVGLVGANGVGKSTFMNIITGQLIHDEGRVEWTPGTNYGYLDQHTILTPG
RTIRDVLADAFLPLFEKEKALNEVTEKMGTATPEELEELLEQMAEIQDALEAGGFYLLDIKIEEAARGLGIDAIGLDRDV
VALSGGQRTKVLLAKLLLEQPEVLLLDEPTNYLDVEHIHWLTNYLKEYPHAFLLISHDTEFMNKCVDVIFHLEFTKMTRY
TATYEKFLELAEINKNQHINAYEKQREFIKKQEDFIAKNKARYSTTGRAKSRQKQLDRMERIDRPETAIKPEFSFKESRA
SSRFVFEGENVEIGYTHPLLPKLTMTIERGEKIAIVGCNGVGKSTLLKTILGKIKPLSGKTSLGDFLNPSYFEQEVKADN
ITPIDDVWNTFPSLDQHQIRAMLAKCGLKNEHISRPLNQLSGGEQAKVRLCKLMGEESNWLLFDEPTNHLDVTAKEELKK
AMKAYKGTILLVCHEPDFYEDWVTKTWDVEKWAQENS
>Mature_516_residues
SLLTVEKLGHTFGDRTLFKDVSMRLLAGEHVGLVGANGVGKSTFMNIITGQLIHDEGRVEWTPGTNYGYLDQHTILTPGR
TIRDVLADAFLPLFEKEKALNEVTEKMGTATPEELEELLEQMAEIQDALEAGGFYLLDIKIEEAARGLGIDAIGLDRDVV
ALSGGQRTKVLLAKLLLEQPEVLLLDEPTNYLDVEHIHWLTNYLKEYPHAFLLISHDTEFMNKCVDVIFHLEFTKMTRYT
ATYEKFLELAEINKNQHINAYEKQREFIKKQEDFIAKNKARYSTTGRAKSRQKQLDRMERIDRPETAIKPEFSFKESRAS
SRFVFEGENVEIGYTHPLLPKLTMTIERGEKIAIVGCNGVGKSTLLKTILGKIKPLSGKTSLGDFLNPSYFEQEVKADNI
TPIDDVWNTFPSLDQHQIRAMLAKCGLKNEHISRPLNQLSGGEQAKVRLCKLMGEESNWLLFDEPTNHLDVTAKEELKKA
MKAYKGTILLVCHEPDFYEDWVTKTWDVEKWAQENS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=28.6792452830189, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=29.3785310734463, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=29.3785310734463, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=27.4766355140187, Blast_Score=169, Evalue=8e-42,
Organism=Homo sapiens, GI27881506, Length=533, Percent_Identity=27.2045028142589, Blast_Score=168, Evalue=9e-42,
Organism=Escherichia coli, GI1787041, Length=513, Percent_Identity=29.6296296296296, Blast_Score=242, Evalue=5e-65,
Organism=Escherichia coli, GI1789751, Length=488, Percent_Identity=30.327868852459, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI2367384, Length=512, Percent_Identity=29.6875, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1787182, Length=524, Percent_Identity=30.5343511450382, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1786253, Length=179, Percent_Identity=29.608938547486, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=199, Percent_Identity=27.6381909547739, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI48994883, Length=259, Percent_Identity=27.4131274131274, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787112, Length=212, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=175, Percent_Identity=26.2857142857143, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788506, Length=245, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1790739, Length=198, Percent_Identity=24.2424242424242, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1790190, Length=255, Percent_Identity=27.4509803921569, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=523, Percent_Identity=28.2982791586998, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17555318, Length=529, Percent_Identity=28.5444234404537, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17553372, Length=526, Percent_Identity=27.9467680608365, Blast_Score=184, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6321121, Length=519, Percent_Identity=28.5163776493256, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6320874, Length=504, Percent_Identity=29.9603174603175, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=28.2776349614396, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=389, Percent_Identity=23.6503856041131, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=390, Percent_Identity=23.8461538461538, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24666836, Length=521, Percent_Identity=28.7907869481766, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=28.2982791586998, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=28.2982791586998, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24641342, Length=495, Percent_Identity=29.4949494949495, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI28574259, Length=175, Percent_Identity=27.4285714285714, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585557, Length=179, Percent_Identity=26.8156424581006, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45552437, Length=179, Percent_Identity=26.2569832402235, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58812; Mature: 58681

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLTVEKLGHTFGDRTLFKDVSMRLLAGEHVGLVGANGVGKSTFMNIITGQLIHDEGRV
CCCEEHHHHCCHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCE
EWTPGTNYGYLDQHTILTPGRTIRDVLADAFLPLFEKEKALNEVTEKMGTATPEELEELL
EECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQMAEIQDALEAGGFYLLDIKIEEAARGLGIDAIGLDRDVVALSGGQRTKVLLAKLLLEQ
HHHHHHHHHHHHCCEEEEEEEEHHHHCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHCC
PEVLLLDEPTNYLDVEHIHWLTNYLKEYPHAFLLISHDTEFMNKCVDVIFHLEFTKMTRY
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TATYEKFLELAEINKNQHINAYEKQREFIKKQEDFIAKNKARYSTTGRAKSRQKQLDRME
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RIDRPETAIKPEFSFKESRASSRFVFEGENVEIGYTHPLLPKLTMTIERGEKIAIVGCNG
HCCCCCCCCCCCCCCHHHCCCCEEEEECCCEEEECCCCCCHHHEEEEECCCEEEEEECCC
VGKSTLLKTILGKIKPLSGKTSLGDFLNPSYFEQEVKADNITPIDDVWNTFPSLDQHQIR
CCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHH
AMLAKCGLKNEHISRPLNQLSGGEQAKVRLCKLMGEESNWLLFDEPTNHLDVTAKEELKK
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
AMKAYKGTILLVCHEPDFYEDWVTKTWDVEKWAQENS
HHHHHCCEEEEEECCCCHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SLLTVEKLGHTFGDRTLFKDVSMRLLAGEHVGLVGANGVGKSTFMNIITGQLIHDEGRV
CCEEHHHHCCHHCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCE
EWTPGTNYGYLDQHTILTPGRTIRDVLADAFLPLFEKEKALNEVTEKMGTATPEELEELL
EECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQMAEIQDALEAGGFYLLDIKIEEAARGLGIDAIGLDRDVVALSGGQRTKVLLAKLLLEQ
HHHHHHHHHHHHCCEEEEEEEEHHHHCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHCC
PEVLLLDEPTNYLDVEHIHWLTNYLKEYPHAFLLISHDTEFMNKCVDVIFHLEFTKMTRY
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TATYEKFLELAEINKNQHINAYEKQREFIKKQEDFIAKNKARYSTTGRAKSRQKQLDRME
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RIDRPETAIKPEFSFKESRASSRFVFEGENVEIGYTHPLLPKLTMTIERGEKIAIVGCNG
HCCCCCCCCCCCCCCHHHCCCCEEEEECCCEEEECCCCCCHHHEEEEECCCEEEEEECCC
VGKSTLLKTILGKIKPLSGKTSLGDFLNPSYFEQEVKADNITPIDDVWNTFPSLDQHQIR
CCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHH
AMLAKCGLKNEHISRPLNQLSGGEQAKVRLCKLMGEESNWLLFDEPTNHLDVTAKEELKK
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
AMKAYKGTILLVCHEPDFYEDWVTKTWDVEKWAQENS
HHHHHCCEEEEEECCCCHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]