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The map label for this gene is yfiY [H]

Identifier: 49188214

GI number: 49188214

Start: 5116305

End: 5117249

Strand: Reverse

Name: yfiY [H]

Synonym: BAS5229

Alternate gene names: 49188214

Gene position: 5117249-5116305 (Counterclockwise)

Preceding gene: 49188215

Following gene: 49188213

Centisome position: 97.87

GC content: 34.5

Gene sequence:

>945_bases
ATGAAGAATTTTAAAATGGCGTTATTAGCAATGGTACTAGTCGTTACTTCTGTACTATTTGCAGCTTGTTCTAACAAAGA
AGAAAAGAAAGCAGATGCGAAGGATGCGAAGACTGAAGAGCGCACTGTACAACATGCAAAAGGGGAAATTAAAATCCCTG
CAAATCCAAAGAAAATTGCTGACCTTAGTGGTTCAACAGAAGAATTATTAATCTTTGGTATGAAACCAATTATTACTGCT
AATACATCTCAAGAAAAAATTGATGCACATATTGAAAAGAAATTAAAAGACGTAAAACCAGTTGGTTCTGCTTGGGGCGA
TAAAATTAACATCGAAGCAGTAGCTGCTGCAAAACCAGACTTAATTCTTGTAAACAATCGTCAAGAAAAGATTTATGATC
AATTATCTAAAATTGCACCAACAGTTATGTTAAAAACTCCATTAGACCAATGGCGTCCAAAATTCGAAGAAGTAGGTCAA
ATCTTCGGTAAAGAGAAAGAAACAAAAGAATGGTTCAAACAGTATGATGAAAAAGCAAGCAAATTACATGACAAAATCGT
TGCGAAAACTGGCGATGCTAAATTCATGAAAATGGCTGCATATCCAAATGCTTTCCGTGTATATGGTGACTACGGTTACG
GTAGCGTAATCTTTAATGATTTAAAATTACCAGCAGTTAAAGGTACACCAACTGATAAACCGTTAGTACAAGTGCAAAAA
GAAGCTTTAATTGATTACAACCCAGATTACTTATTCGTATTTACGACTGGTGACGGTTCTCAGCGCCTAAAAGAATTCCA
AGAAGAATCAATTTGGAAAAATATGAACGCTGTTAAAAACAACCACGTATTTACAATTAAAAACGAAGAATTAAACAAAG
GTTACTTCCCACTAGGTAAAGAAATGATCTTAGATGAAGTTGCTGAGTTCGTTTTAGGGAAATAA

Upstream 100 bases:

>100_bases
ATAAATAACAATTAATAAATATATATTGATTAATTGTTAATCTTGTTTCTTATAGTTCACCGTAACTTATAAGAGAAATA
CAGCTAGAAGGAGTGGGAAC

Downstream 100 bases:

>100_bases
TGTATAAAAAGAGATCACTTTTACTCCGGTAAAGGTGATTTTTTCTTTTTATAAAGGCAATTCATATAGTCTTTCATTTC
TTTCTGTTTCCTATTTCGTT

Product: iron compound ABC transporter iron compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKNFKMALLAMVLVVTSVLFAACSNKEEKKADAKDAKTEERTVQHAKGEIKIPANPKKIADLSGSTEELLIFGMKPIITA
NTSQEKIDAHIEKKLKDVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFEEVGQ
IFGKEKETKEWFKQYDEKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFNDLKLPAVKGTPTDKPLVQVQK
EALIDYNPDYLFVFTTGDGSQRLKEFQEESIWKNMNAVKNNHVFTIKNEELNKGYFPLGKEMILDEVAEFVLGK

Sequences:

>Translated_314_residues
MKNFKMALLAMVLVVTSVLFAACSNKEEKKADAKDAKTEERTVQHAKGEIKIPANPKKIADLSGSTEELLIFGMKPIITA
NTSQEKIDAHIEKKLKDVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFEEVGQ
IFGKEKETKEWFKQYDEKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFNDLKLPAVKGTPTDKPLVQVQK
EALIDYNPDYLFVFTTGDGSQRLKEFQEESIWKNMNAVKNNHVFTIKNEELNKGYFPLGKEMILDEVAEFVLGK
>Mature_314_residues
MKNFKMALLAMVLVVTSVLFAACSNKEEKKADAKDAKTEERTVQHAKGEIKIPANPKKIADLSGSTEELLIFGMKPIITA
NTSQEKIDAHIEKKLKDVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFEEVGQ
IFGKEKETKEWFKQYDEKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFNDLKLPAVKGTPTDKPLVQVQK
EALIDYNPDYLFVFTTGDGSQRLKEFQEESIWKNMNAVKNNHVFTIKNEELNKGYFPLGKEMILDEVAEFVLGK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35425; Mature: 35425

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFKMALLAMVLVVTSVLFAACSNKEEKKADAKDAKTEERTVQHAKGEIKIPANPKKIA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCHHHHHHHHHCCCCEEECCCCHHHH
DLSGSTEELLIFGMKPIITANTSQEKIDAHIEKKLKDVKPVGSAWGDKINIEAVAAAKPD
HCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCC
LILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFEEVGQIFGKEKETKEWFKQYDEKAS
EEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFNDLKLPAVKGTPTDKPLVQVQK
HHHHHHHHCCCCHHHEEHHCCCCEEEEEECCCCCCEEEECCCCCEECCCCCCCHHHHHHH
EALIDYNPDYLFVFTTGDGSQRLKEFQEESIWKNMNAVKNNHVFTIKNEELNKGYFPLGK
HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCH
EMILDEVAEFVLGK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKNFKMALLAMVLVVTSVLFAACSNKEEKKADAKDAKTEERTVQHAKGEIKIPANPKKIA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCHHHHHHHHHCCCCEEECCCCHHHH
DLSGSTEELLIFGMKPIITANTSQEKIDAHIEKKLKDVKPVGSAWGDKINIEAVAAAKPD
HCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCC
LILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFEEVGQIFGKEKETKEWFKQYDEKAS
EEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFNDLKLPAVKGTPTDKPLVQVQK
HHHHHHHHCCCCHHHEEHHCCCCEEEEEECCCCCCEEEECCCCCEECCCCCCCHHHHHHH
EALIDYNPDYLFVFTTGDGSQRLKEFQEESIWKNMNAVKNNHVFTIKNEELNKGYFPLGK
HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCH
EMILDEVAEFVLGK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]