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The map label for this gene is ywfO [H]

Identifier: 49188213

GI number: 49188213

Start: 5114854

End: 5116158

Strand: Reverse

Name: ywfO [H]

Synonym: BAS5228

Alternate gene names: 49188213

Gene position: 5116158-5114854 (Counterclockwise)

Preceding gene: 49188214

Following gene: 49188211

Centisome position: 97.85

GC content: 36.09

Gene sequence:

>1305_bases
GTGGTATATTTAAACGACAAACTCAGCGAAACAAAAGTGTTTAAAGACCCGGTACATAAATATGTGCACGTGCGCGATCG
TGTTATTTGGGATTTAATCGGAACGAAAGAATTTCAACGCTTGCGCCGTATTAAGCAGCTTGGAACGACATTTTTTACAT
TTCACGGTGCAGAGCATAGTCGCTTTACTCATTCGTTAGGTGTATATGAAATTATTCGTCGTATGATTGATGATGTGTTT
GATGGCAGACCGAACTGGAATGCTGAAGATAGATTGTTATGCTTATGTGCGGCATTACTTCATGATGTCGGTCACGGCCC
ATTTTCTCATTCGTTTGAGAAAGTATTTTCATTAGATCATGAGAAATTTACGCAAAAGATTATCGTTGGAGATACAGAAA
TTAATCGCGTATTAAGTCGTGTGGATAAAGACTTTCCGCAAAAGGTAGCGGATGTAATCGCAAAAACATCTAATAATAAA
TTAGCGATTAGCATGATTTCCAGTCAAATTGATGCAGATCGCATGGACTACTTATTAAGAGATGCGTATTTTACTGGCGT
AAAGTATGGAAACTTTGATATGGAACGTATACTGCGCGTTATGCGTCCGTACGGAAATCAAGTAGTTATTAAAAATAGTG
GTATGCATGCTGTTGAACATTATATTATGAGTCGTTATCAAATGTACTGGCAAGTATATTTCCATCCAGTAACACGCAGT
GCTGAAGTTATTTTAACGAAGATTTTACACCGTGCAAAATCATTGCACGAGAAGTACTATACATTTAAAAATCATCCGGT
TCATTTCTATTCTTTATTTGAAGAAGAAGTAACAGTAGAGGATTATTTAAAGTTAGACGAGAACGTTATGTATTATTACT
TCCAAGTATGGCAAGACGAAGAGGATCCAATTTTAAGTGATTTATGTCGCCGTTTTATGAATCGAAACCTATTTAAATAT
GTAGAGTTTACAGATAAGCACGGTTTAGATAATTGGATGGAATTAAGTAGCTTATTCAAAAAGATTGGACTTGATCCAGA
ATACTATTTAGTAGTTGATTCAACATCAGACTTACCGTACGACTTTTACCGTGCTGGTGAAGAAGAAGAACGTCTGCCAA
TCTTACTTCTTATGCCAAATGGAGAGCTTAGAGAGCTTTCACGTGAATCGGATATTGTTGAGGCGATTACTGGTAAGAAG
AGAAGGGACCAGAAATTATTCTATCCACATGATTTAATCTATGAAGATGGAAGAAAAGGAAAATATAAAGAGAGAATCAT
CGAGTTACTCGAAGGAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTATAAAGGCAATTCATATAGTCTTTCATTTCTTTCTGTTTCCTATTTCGTTTATAATATATAGTAAGAATGCAGTAA
AGAAAGGGGGATGTCGGAAA

Downstream 100 bases:

>100_bases
GAAGCAGCTAAGAGCTGCTTCTTATGAAAGAACTTGAAATTATTTGTCGCTTAAGCGTTTTCCGCCAACTGCATAATGGT
TTTTAGACATTTCTTCGATG

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MVYLNDKLSETKVFKDPVHKYVHVRDRVIWDLIGTKEFQRLRRIKQLGTTFFTFHGAEHSRFTHSLGVYEIIRRMIDDVF
DGRPNWNAEDRLLCLCAALLHDVGHGPFSHSFEKVFSLDHEKFTQKIIVGDTEINRVLSRVDKDFPQKVADVIAKTSNNK
LAISMISSQIDADRMDYLLRDAYFTGVKYGNFDMERILRVMRPYGNQVVIKNSGMHAVEHYIMSRYQMYWQVYFHPVTRS
AEVILTKILHRAKSLHEKYYTFKNHPVHFYSLFEEEVTVEDYLKLDENVMYYYFQVWQDEEDPILSDLCRRFMNRNLFKY
VEFTDKHGLDNWMELSSLFKKIGLDPEYYLVVDSTSDLPYDFYRAGEEEERLPILLLMPNGELRELSRESDIVEAITGKK
RRDQKLFYPHDLIYEDGRKGKYKERIIELLEGKK

Sequences:

>Translated_434_residues
MVYLNDKLSETKVFKDPVHKYVHVRDRVIWDLIGTKEFQRLRRIKQLGTTFFTFHGAEHSRFTHSLGVYEIIRRMIDDVF
DGRPNWNAEDRLLCLCAALLHDVGHGPFSHSFEKVFSLDHEKFTQKIIVGDTEINRVLSRVDKDFPQKVADVIAKTSNNK
LAISMISSQIDADRMDYLLRDAYFTGVKYGNFDMERILRVMRPYGNQVVIKNSGMHAVEHYIMSRYQMYWQVYFHPVTRS
AEVILTKILHRAKSLHEKYYTFKNHPVHFYSLFEEEVTVEDYLKLDENVMYYYFQVWQDEEDPILSDLCRRFMNRNLFKY
VEFTDKHGLDNWMELSSLFKKIGLDPEYYLVVDSTSDLPYDFYRAGEEEERLPILLLMPNGELRELSRESDIVEAITGKK
RRDQKLFYPHDLIYEDGRKGKYKERIIELLEGKK
>Mature_434_residues
MVYLNDKLSETKVFKDPVHKYVHVRDRVIWDLIGTKEFQRLRRIKQLGTTFFTFHGAEHSRFTHSLGVYEIIRRMIDDVF
DGRPNWNAEDRLLCLCAALLHDVGHGPFSHSFEKVFSLDHEKFTQKIIVGDTEINRVLSRVDKDFPQKVADVIAKTSNNK
LAISMISSQIDADRMDYLLRDAYFTGVKYGNFDMERILRVMRPYGNQVVIKNSGMHAVEHYIMSRYQMYWQVYFHPVTRS
AEVILTKILHRAKSLHEKYYTFKNHPVHFYSLFEEEVTVEDYLKLDENVMYYYFQVWQDEEDPILSDLCRRFMNRNLFKY
VEFTDKHGLDNWMELSSLFKKIGLDPEYYLVVDSTSDLPYDFYRAGEEEERLPILLLMPNGELRELSRESDIVEAITGKK
RRDQKLFYPHDLIYEDGRKGKYKERIIELLEGKK

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Homo sapiens, GI38016914, Length=359, Percent_Identity=26.7409470752089, Blast_Score=106, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17537827, Length=337, Percent_Identity=29.673590504451, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17537829, Length=337, Percent_Identity=29.673590504451, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI221512937, Length=265, Percent_Identity=24.9056603773585, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24666702, Length=267, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51710; Mature: 51710

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLNDKLSETKVFKDPVHKYVHVRDRVIWDLIGTKEFQRLRRIKQLGTTFFTFHGAEHS
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCHH
RFTHSLGVYEIIRRMIDDVFDGRPNWNAEDRLLCLCAALLHDVGHGPFSHSFEKVFSLDH
HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
EKFTQKIIVGDTEINRVLSRVDKDFPQKVADVIAKTSNNKLAISMISSQIDADRMDYLLR
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHH
DAYFTGVKYGNFDMERILRVMRPYGNQVVIKNSGMHAVEHYIMSRYQMYWQVYFHPVTRS
HHHHHCCEECCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCH
AEVILTKILHRAKSLHEKYYTFKNHPVHFYSLFEEEVTVEDYLKLDENVMYYYFQVWQDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCC
EDPILSDLCRRFMNRNLFKYVEFTDKHGLDNWMELSSLFKKIGLDPEYYLVVDSTSDLPY
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
DFYRAGEEEERLPILLLMPNGELRELSRESDIVEAITGKKRRDQKLFYPHDLIYEDGRKG
HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
KYKERIIELLEGKK
HHHHHHHHHHCCCC
>Mature Secondary Structure
MVYLNDKLSETKVFKDPVHKYVHVRDRVIWDLIGTKEFQRLRRIKQLGTTFFTFHGAEHS
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCHH
RFTHSLGVYEIIRRMIDDVFDGRPNWNAEDRLLCLCAALLHDVGHGPFSHSFEKVFSLDH
HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
EKFTQKIIVGDTEINRVLSRVDKDFPQKVADVIAKTSNNKLAISMISSQIDADRMDYLLR
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHH
DAYFTGVKYGNFDMERILRVMRPYGNQVVIKNSGMHAVEHYIMSRYQMYWQVYFHPVTRS
HHHHHCCEECCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEECCCCH
AEVILTKILHRAKSLHEKYYTFKNHPVHFYSLFEEEVTVEDYLKLDENVMYYYFQVWQDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCC
EDPILSDLCRRFMNRNLFKYVEFTDKHGLDNWMELSSLFKKIGLDPEYYLVVDSTSDLPY
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
DFYRAGEEEERLPILLLMPNGELRELSRESDIVEAITGKKRRDQKLFYPHDLIYEDGRKG
HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
KYKERIIELLEGKK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7934828 [H]