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The map label for this gene is yknX [H]

Identifier: 49188092

GI number: 49188092

Start: 4985569

End: 4986762

Strand: Reverse

Name: yknX [H]

Synonym: BAS5106

Alternate gene names: 49188092

Gene position: 4986762-4985569 (Counterclockwise)

Preceding gene: 49188095

Following gene: 49188091

Centisome position: 95.37

GC content: 38.94

Gene sequence:

>1194_bases
ATGGTACCAAATACGGTTCGTACTCCAAACAAGAAGAAGAAATGGATTATTATCGGAGTTATTGCACTAATTGTTATTGT
AGCAGCAGTTAATATTTTTGTTATGCAAGGTAAGAAGAAGGGGGCATCAACATCTGCTGATGCTGTAAGTTTTGAGAAGG
TAACGGAGCGAAAGTTGAATAATACGAAGTTAATTTCTGGTCAGGTGAAGCCTGGGAATATCGAAAGTTTTTATGCGGAT
CCGGCCAAAGGGAAAGTGAAAGATATTGAGGTAAAAGAAGGCCAAGAGGTAGAGAAAGGTGCGAAGTTATTCTCTTATGA
TAATGAAGAGATTAATTTGCAAATGAAGCAAGCTGATCTTGATCAGAAGATGGCAGATATGCGTTATGATCAAGGGAAGA
AGAAGATTGATTCGTTGAAGAAAGAAATTAAGAAGGCAAAAGATAGCGGAGCTGGGAAAGAAGTAACAGATCCGATGGAA
GAGCAAGTAAGTGAGTTAGAGATGGCGCAAAAGACAACGGATCTGGAGAAAGAAAAAGGGAAGTTGCAGAAAGAAGAGTT
AAGTAAAAAGCAGAAAGAGCTTACGATTTATAGTAACTTTGCTGGTGTTGTTCAAAAGTTAGATAAAGATGCGGCGCAAA
GTTCATCTCAAGCGTTAGGTGGTCAAGGGAAAGCCTTCTTACAAGTGGCTTCTAAAGATCCGTTCCAAATTCAAGGGACG
TTAACTGAGCTTCAAAAGTCACAAATTCAAAAAGATCAAACATTTACTGTTACTGCGAAAGCAAATAATAAGAAGAAGTG
GACAGGTAAGATTACAGAAGTAAGTGAATTCCCAACGAGTGCAGAGATGGCGCAAGCCGGTGGTATGGGTGAAGCGACTC
AAAATATGTCTCAATATACATATAAAGCAAGCCTTGATAGTCAAGATGGTTTATCTCCAGGTTATCACGTTTCTCTGCAA
GTAAATTTAGAGAATAAGACGATGGTTGCTGTTCCGACTAAGAGTATTGTAGAAAAAGATGATGATGCATTTGTTTATGT
TGAGGATAAAGGAAAGCTTCGTAAACAAAATGTGAAAAAAGGTTCTACTGATGGGGACTGGACAGAGATTACTGAAGGCG
TAACAGTGGGGCAAAAGGTGGTTAAAAATCCTTCCGACGATGTGTATGACGGAATGGAAGTGAAAGAGAAATGA

Upstream 100 bases:

>100_bases
GTAAAACTTTGTAAAAAGAATGTAATAATATGCAATTATTTTTCAGAAAGTTTTATACAATTTTTATATTAAACTATTAA
GTTATAAAAGGAGCGAGAAT

Downstream 100 bases:

>100_bases
TTACGCTAAATCATATTGCTAAAACGTATTATCAAGGAAAATTGGCAGTGCCGATTTTGCATGGTATTAGTTTAACGATT
CAGAGCGGCGAGTTCGTTTC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEMAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSAEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK

Sequences:

>Translated_397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEMAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSAEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
>Mature_397_residues
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLNNTKLISGQVKPGNIESFYAD
PAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADLDQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPME
EQVSELEMAQKTTDLEKEKGKLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSAEMAQAGGMGEATQNMSQYTYKASLDSQDGLSPGYHVSLQ
VNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKKGSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43813; Mature: 43813

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLN
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCC
NTKLISGQVKPGNIESFYADPAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADL
CCEEEECCCCCCCCHHEECCCCCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEHHHH
DQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPMEEQVSELEMAQKTTDLEKEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
CCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHH
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSAEMAQAGGMGEATQNMSQYT
HHHHHHHHHCCCCEEEEEEECCCCCEECCCCEEHHHCCCHHHHHHCCCCCHHHHHHHHEE
YKASLDSQDGLSPGYHVSLQVNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKK
EEECCCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHCCC
GSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MVPNTVRTPNKKKKWIIIGVIALIVIVAAVNIFVMQGKKKGASTSADAVSFEKVTERKLN
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCC
NTKLISGQVKPGNIESFYADPAKGKVKDIEVKEGQEVEKGAKLFSYDNEEINLQMKQADL
CCEEEECCCCCCCCHHEECCCCCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEHHHH
DQKMADMRYDQGKKKIDSLKKEIKKAKDSGAGKEVTDPMEEQVSELEMAQKTTDLEKEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KLQKEELSKKQKELTIYSNFAGVVQKLDKDAAQSSSQALGGQGKAFLQVASKDPFQIQGT
CCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHH
LTELQKSQIQKDQTFTVTAKANNKKKWTGKITEVSEFPTSAEMAQAGGMGEATQNMSQYT
HHHHHHHHHCCCCEEEEEEECCCCCEECCCCEEHHHCCCHHHHHHCCCCCHHHHHHHHEE
YKASLDSQDGLSPGYHVSLQVNLENKTMVAVPTKSIVEKDDDAFVYVEDKGKLRKQNVKK
EEECCCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHCCCCCEEEEECCCCCHHHHHCCC
GSTDGDWTEITEGVTVGQKVVKNPSDDVYDGMEVKEK
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]