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The map label for this gene is swrAB [H]

Identifier: 49188017

GI number: 49188017

Start: 4902983

End: 4904185

Strand: Reverse

Name: swrAB [H]

Synonym: BAS5031

Alternate gene names: 49188017

Gene position: 4904185-4902983 (Counterclockwise)

Preceding gene: 49188018

Following gene: 49188016

Centisome position: 93.79

GC content: 40.23

Gene sequence:

>1203_bases
ATGGTGGTGAATGGGTTCGTGGAGGCATGGATTTTTGAAATAATGCGGGCAGTTGGACGTTTTTTCTTACACCCTGCTGT
CTATGTATTTTTAATAAGTAGTATCTTCGTTGGATACTTACGTATGTTACGAGAACGAAAAGATTTTTCTTTTAAAGTTT
ATGATATTTGGTTTGAACTGCGAACAGCTTTATTTGCGGGGATTGGGTATGGATTAGTAGTATCTATTATTACGATTGGG
CTCGGACTTGTCGTTTCTAAAGCGAGCTTATGGGCCATTTTACTTTGGACATTACTATTTGGATTAACTGCTATGTACCG
ATATTTATCAGCAGCTTATACGTTTAGTATCGCGATTGTATGTGTTCTATTATCTTCTAAGCTACCAGTTTCCTTCTTAC
AGCTTGGGGAAGGTGAAGAGAATACAATTGTGTCCCTTGCTATTTTGCTAGGCATTATGCTCGTTGTAGAGGGCTTGTTG
ATTTCTAAAAATGCAGTAGGATATTCGACGCCGAAGATTAGGAAGGGTAAGCGTGGACTAAAGATTGGTTTACACGAATC
AAAGCGTTTATGGATCATTCCTATTTTTATTCTCGTACCAGGTGACGCAGTAACGCAGTTTATTTCATGGTGGCCTGTCG
TTTCAATCGGTTCTGATACATATTCCCTATTCCTCGTTCCATTTTTAATTGGATTTATGAGAAGGATTAGAAGTTATGAG
CCGACGGAAGCTTTATTATTTACAGGAAGACGTGTGTACGGATTAGCAGGACTTGTACTCGTTTTAGGAATCGCAAGTTA
TTGGTGGCACGTGCTTGCAATTATCGCAATGGGTGTTGCGATGCTTGGACGATTCACGATTTCCATGCAAGAGAAAATTT
CTGATGAGACAAGACCAGCGTATTTCGCTGCACGTAATGATGGACTCGTTGTATTAGATACAATCCCGAATACAATTGGG
GCAGAGCTGAATTTACTACCCGGAGAAATGATTACGAAAGTAAATGGAGTCATTCCAAGAAGCGCTGAGGAATTTTATGA
TGCGCTTCAAACGAAGACGACAGGAGCATTTTGTAAATTAGAAGTATTAGATACAAATGGTGAGCTTCGCCTTGCTCAAA
CGGCATTATACGCCGGAGGACATCATGAACTAGGTATTGTATTTGTTCAGCAGGAGCATGAGTGGGATTCGGAAGCGATG
TAA

Upstream 100 bases:

>100_bases
GCGAAATAAAAAGAAATACAGGCAGTTTGCTGCCTGTATTTTTTTGTGTTAAACAAACGCTTGTCCAGTTATGATAATAT
AAAAAGAAAGAATGATATAA

Downstream 100 bases:

>100_bases
TAGAAGTGAGGGTGTCACCTTGAGGTGACGCCCTTTTTTGTTGGGGGCGGAGGAAGGTAGTTAGTAAATGAAATTTATAT
CGGCGATTTTCCGAACATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVVNGFVEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIG
LGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLL
ISKNAVGYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYE
PTEALLFTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIG
AELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM

Sequences:

>Translated_400_residues
MVVNGFVEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIG
LGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLL
ISKNAVGYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYE
PTEALLFTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIG
AELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
>Mature_400_residues
MVVNGFVEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIG
LGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLL
ISKNAVGYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYE
PTEALLFTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIG
AELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44600; Mature: 44600

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVNGFVEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFEL
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
RTALFAGIGYGLVVSIITIGLGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAVGYSTPKIRKGKRGL
HHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
KIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYE
EEECCCCCEEEEEEEEEEECCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
PTEALLFTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPA
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YFAARNDGLVVLDTIPNTIGAELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKL
EEEECCCCEEEEECCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE
EVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
EEEECCCCEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MVVNGFVEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFEL
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
RTALFAGIGYGLVVSIITIGLGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAVGYSTPKIRKGKRGL
HHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
KIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYE
EEECCCCCEEEEEEEEEEECCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCC
PTEALLFTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPA
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YFAARNDGLVVLDTIPNTIGAELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKL
EEEECCCCEEEEECCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE
EVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
EEEECCCCEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]