Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is tyrS2 [H]
Identifier: 49187924
GI number: 49187924
Start: 4818783
End: 4820042
Strand: Reverse
Name: tyrS2 [H]
Synonym: BAS4936
Alternate gene names: 49187924
Gene position: 4820042-4818783 (Counterclockwise)
Preceding gene: 49187925
Following gene: 49187920
Centisome position: 92.18
GC content: 38.02
Gene sequence:
>1260_bases ATGAATATCATTGATGAATTAGAATGGCGCGGTGCTGTTAATCAACAGACTGACGAAGAAGGTTTACGTAAGCTAGTAGA GGAGAAAAAGATTTCGCTATACTGCGGAGTTGATCCGACTGGTGATAGTATGCATATCGGACATTTGATTCCGTTTATGA TGATGAAAAGATTCCAATTAGCTGGTCATCATCCAGTTATTTTAATCGGCGGTGCAACAGGAACAATTGGTGATCCGAGT GGGCGTCAATCAGAACGCCAACTGCAAACGTTAGAAGTAGTGCAGCATAATGTGGATGCATTAACAGCGCAAATGAAAAA GCTATTTGATTTTGGCGGAAATAGCGAAGTGAAGATGGTAAATAACTACGACTGGACACATGAAATAAATATTATTGAGT TTTTACGTGATTACGGGAAAAACTTTAGCATTAATAGCATGTTAGCAAAAGACATCGTAGCAAGTCGTTTAGATACAGGA ATTTCTTTCACAGAATTTACGTACCAAATCTTGCAAGCGATGGACTTCCATCATTTATACACGAAAGAAGATGTTCAACT ACAAATTGGTGGTAGTGACCAATGGGGAAATATTACGAGTGGTTTAGATTTAATTCGTAAGTTAGAAGGGCACGAAGCAA AAGTATTTGGATTGACGATTCCGTTACTATTGAAATCAGATGGTACAAAGTTTGGTAAATCAGCAGGTGGTGCGGTTTGG CTTGATCCTGAAAAAACAACACCATTTGAATTTTACCAGTTCTGGGTAAATACAGATGACCGTGATGTCGTTAAATACTT AAAATACTTTACGTTCTTAACGAAAGAGCGTATTGATGAATTGGCAGTGAAGGTAGAAACAGAGCCTCATAAACGTGAAG CGCAAAAAGTATTAGCGGAAGAAATGACGAAATTCGTTCATGGAGAAGAAGCATTGCTGCAAGCTGTGAAAATTACAGCA GCGTTATTTAGCGGAGATATTAAATCGTTAACAGCTGATGAAATTGAGCAAGGCTTTAAAGAAATGCCAACATTCCAGTC TTCAAAAGAGACGAAAAACATCGTAGAATGGCTAGTTGATTTAGGAATTGAACCATCTAGACGACAAGCGCGTGAAGATA TTAATAACGGAGCTATTTCTATGAATGGCGAAAAAGTAACGGATGTAGGTACGGATGTTACGGTAGAAAATTCCTTTGAT GGACGATTTATTATTATTCGTAAAGGGAAGAAGAACTACAGCCTTGTGAAGTTAGGATAA
Upstream 100 bases:
>100_bases GCTATTTATACAAACTGGGTGGTAACACGGTGAATAATCGTCCCTATGTCATAGACATAGGGATTTTTTGTTTTTAAAAA AATAAAGGGGATGACAAAAG
Downstream 100 bases:
>100_bases TGAAGAAGGTGGAAAAATTATATCGGCGATTTTTTGAATATATAGACCGTAACTCGAATTATATCGGCGATTTTTAAAAT ATATCGATCGTAATTTGAAT
Product: tyrosyl-tRNA synthetase
Products: NA
Alternate protein names: Tyrosine--tRNA ligase 2; TyrRS 2 [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPS GRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVNNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDTG ISFTEFTYQILQAMDFHHLYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVW LDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMTKFVHGEEALLQAVKITA ALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFD GRFIIIRKGKKNYSLVKLG
Sequences:
>Translated_419_residues MNIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPS GRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVNNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDTG ISFTEFTYQILQAMDFHHLYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVW LDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMTKFVHGEEALLQAVKITA ALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFD GRFIIIRKGKKNYSLVKLG >Mature_419_residues MNIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPVILIGGATGTIGDPS GRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMVNNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDTG ISFTEFTYQILQAMDFHHLYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVW LDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMTKFVHGEEALLQAVKITA ALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFD GRFIIIRKGKKNYSLVKLG
Specific function: Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction:tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) [H]
COG id: COG0162
COG function: function code J; Tyrosyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S4 RNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI94681057, Length=411, Percent_Identity=37.2262773722628, Blast_Score=258, Evalue=8e-69, Organism=Escherichia coli, GI1787925, Length=420, Percent_Identity=50.4761904761905, Blast_Score=426, Evalue=1e-121, Organism=Caenorhabditis elegans, GI25145802, Length=394, Percent_Identity=36.8020304568528, Blast_Score=230, Evalue=9e-61, Organism=Caenorhabditis elegans, GI25145805, Length=331, Percent_Identity=35.0453172205438, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6325160, Length=439, Percent_Identity=37.5854214123007, Blast_Score=304, Evalue=2e-83, Organism=Drosophila melanogaster, GI20130383, Length=415, Percent_Identity=38.5542168674699, Blast_Score=296, Evalue=2e-80,
Paralogues:
None
Copy number: 892 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002305 - InterPro: IPR014729 - InterPro: IPR002942 - InterPro: IPR002307 [H]
Pfam domain/function: PF01479 S4; PF00579 tRNA-synt_1b [H]
EC number: =6.1.1.1 [H]
Molecular weight: Translated: 47351; Mature: 47351
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50889 S4 ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQL CCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHH AGHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMV CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDTGISFTEFTYQILQAMDFHHLY CCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC TKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVW CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEE LDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAE ECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH EMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWLVD HHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKLG CCCCCCHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEEC >Mature Secondary Structure MNIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQL CCCHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHH AGHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFGGNSEVKMV CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRLDTGISFTEFTYQILQAMDFHHLY CCCCCCEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC TKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVW CCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEE LDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAE ECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHH EMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWLVD HHHHHHCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKLG CCCCCCHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCCEEEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]