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The map label for this gene is yqjB [H]

Identifier: 49187887

GI number: 49187887

Start: 4779666

End: 4780127

Strand: Direct

Name: yqjB [H]

Synonym: BAS4899

Alternate gene names: 49187887

Gene position: 4779666-4780127 (Clockwise)

Preceding gene: 49187886

Following gene: 49187888

Centisome position: 91.41

GC content: 36.15

Gene sequence:

>462_bases
ATGAAAAAACTATTATTAGGCGCACTATTATCATTAGGATTTTTAACTATTCCATTCACAAATGCTGAGGCAGCTACAAC
GAAAGATCAACTGATTGTAAACACGCAGTTAAATAAAATGGATTATTATCAAAACGGAAAATTCATAAAGAGTTTTACTG
TCGCTACTGGAAAAGCAGCTACTCCTACACCTAAAGGTACTTTCAAAATCGTAAATAAAATTAAAAATCGTCCTTATTAC
ACAGGCAAAATTAAAGGCGGCGATCCACGTAATCCACTTGGTGACCGTTGGCTCGGACTAAACATGGCAGGAACTTACGG
AACAACTTATGCAATTCATGGTACGAACAATAACCAAGCAATTGGTAAGTGGACAACACTAGGTTGTATTCGTATGTATA
ACAATGATATACACTGGTTATTTGAGCGTATTCCCCAGCAAGCTACTGTCACTGTAAAATAA

Upstream 100 bases:

>100_bases
TAATTTCTTTGAAACATTAGATGAAAATGTAAATAAAGTATTACGAGGATTGCAAATTCATTGTATGTAAGACTACTACA
ATAGTAAAAAGGAGAACATA

Downstream 100 bases:

>100_bases
CCTCAAAGTGCGATTTACGTGTAGCCAAGAATTTTATGTCTTGGCTTATTTTATTTCTTCATTTACAGTAGCAAAACAAC
TGTATTTACATATATAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKKLLLGALLSLGFLTIPFTNAEAATTKDQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYY
TGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQQATVTVK

Sequences:

>Translated_153_residues
MKKLLLGALLSLGFLTIPFTNAEAATTKDQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYY
TGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQQATVTVK
>Mature_153_residues
MKKLLLGALLSLGFLTIPFTNAEAATTKDQLIVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYY
TGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQAIGKWTTLGCIRMYNNDIHWLFERIPQQATVTVK

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=149, Percent_Identity=30.2013422818792, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 17031; Mature: 17031

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLGALLSLGFLTIPFTNAEAATTKDQLIVNTQLNKMDYYQNGKFIKSFTVATGKAA
CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCC
TPTPKGTFKIVNKIKNRPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQA
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCE
IGKWTTLGCIRMYNNDIHWLFERIPQQATVTVK
EEEEEEEEEEEEECCCHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKKLLLGALLSLGFLTIPFTNAEAATTKDQLIVNTQLNKMDYYQNGKFIKSFTVATGKAA
CHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCC
TPTPKGTFKIVNKIKNRPYYTGKIKGGDPRNPLGDRWLGLNMAGTYGTTYAIHGTNNNQA
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCE
IGKWTTLGCIRMYNNDIHWLFERIPQQATVTVK
EEEEEEEEEEEEECCCHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]