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The map label for this gene is yrhO [H]

Identifier: 49187872

GI number: 49187872

Start: 4764336

End: 4765094

Strand: Direct

Name: yrhO [H]

Synonym: BAS4883

Alternate gene names: 49187872

Gene position: 4764336-4765094 (Clockwise)

Preceding gene: 49187867

Following gene: 49187879

Centisome position: 91.12

GC content: 36.5

Gene sequence:

>759_bases
ATGTTACAAAAATTCGGTTTCTCACAATATGAAAGCCAAGCTTACGAAGTTGTCGTATCAAGCAACGAGCCATTAGATGC
TACAACGATTGTGAAGCATTCTGGCGTGCCAAAAGCAAAAATATATGAAGTGCTTGCACGCTTAATCGATAAAGGAATGG
TAATGGATTCTGTTTCAGAGAAGAAAAAGATGTATACAGCATTACCACTCAAGCTAGCAATTGAAAAATTAACGACAGAA
TTTCAATCCAATATTAAAGAACTAGAGACAACTATATCGAAAAAATCATTTACAGATGACCGTGTATGGAGCTTAAAAAT
GCAATCTTCTATTCGCGTTCAAAGTAAAGAACTCATCGAAAATGCAAAAGAATCAATTCGCATTTCAGCTTGGAACGATA
CTCTTTTAGAATATCTTCCGTTATTAGAAGAAAAAGCAAAACAAGGCGTCAAAACCGAATCCCTTATAGTTGGAAAAGTA
GAAACAGACTTAGAAAACATGCATTTTCTAATCCCAGCCGAAGAGCCTAACGCGCTAGAGCGATACTTACTGCTCATCGT
TGACGACCGTGAAATTTTATTTGCTGGCGTAGAGCAAGAGTCATGGCAAGCAATGAAAACAATGTCACAACCTTTCGTGA
AGTTCTTTACAGAATTCTTTTATCACGACGTTGCACTTGCAAAGATTACCCAGAAACACCATGATCTCTTTATGGAAGAT
GAGGAAATTAAGAGTTTATTAATGAAGTTGAGATACTAA

Upstream 100 bases:

>100_bases
ATTCTCACTTCAATCTGAGTAGAAAACCTACTACTACTTGTGCAAAAACAAATAGTTCATTATCCTTAAACTATATAATC
TCATTCGTTCGGAGGGAACT

Downstream 100 bases:

>100_bases
AAAAACGCCTCTATTACAAGGCGTTTTTTTCTACATTTCTTTTCTATTTTTCATTCTTAACACATAAGCACCCGCAATAA
TAAAACTAATTCCTAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLQKFGFSQYESQAYEVVVSSNEPLDATTIVKHSGVPKAKIYEVLARLIDKGMVMDSVSEKKKMYTALPLKLAIEKLTTE
FQSNIKELETTISKKSFTDDRVWSLKMQSSIRVQSKELIENAKESIRISAWNDTLLEYLPLLEEKAKQGVKTESLIVGKV
ETDLENMHFLIPAEEPNALERYLLLIVDDREILFAGVEQESWQAMKTMSQPFVKFFTEFFYHDVALAKITQKHHDLFMED
EEIKSLLMKLRY

Sequences:

>Translated_252_residues
MLQKFGFSQYESQAYEVVVSSNEPLDATTIVKHSGVPKAKIYEVLARLIDKGMVMDSVSEKKKMYTALPLKLAIEKLTTE
FQSNIKELETTISKKSFTDDRVWSLKMQSSIRVQSKELIENAKESIRISAWNDTLLEYLPLLEEKAKQGVKTESLIVGKV
ETDLENMHFLIPAEEPNALERYLLLIVDDREILFAGVEQESWQAMKTMSQPFVKFFTEFFYHDVALAKITQKHHDLFMED
EEIKSLLMKLRY
>Mature_252_residues
MLQKFGFSQYESQAYEVVVSSNEPLDATTIVKHSGVPKAKIYEVLARLIDKGMVMDSVSEKKKMYTALPLKLAIEKLTTE
FQSNIKELETTISKKSFTDDRVWSLKMQSSIRVQSKELIENAKESIRISAWNDTLLEYLPLLEEKAKQGVKTESLIVGKV
ETDLENMHFLIPAEEPNALERYLLLIVDDREILFAGVEQESWQAMKTMSQPFVKFFTEFFYHDVALAKITQKHHDLFMED
EEIKSLLMKLRY

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 29185; Mature: 29185

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKFGFSQYESQAYEVVVSSNEPLDATTIVKHSGVPKAKIYEVLARLIDKGMVMDSVSE
CCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
KKKMYTALPLKLAIEKLTTEFQSNIKELETTISKKSFTDDRVWSLKMQSSIRVQSKELIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
NAKESIRISAWNDTLLEYLPLLEEKAKQGVKTESLIVGKVETDLENMHFLIPAEEPNALE
HHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCEEEEECCCCCHHH
RYLLLIVDDREILFAGVEQESWQAMKTMSQPFVKFFTEFFYHDVALAKITQKHHDLFMED
HEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EEIKSLLMKLRY
HHHHHHHHHHCC
>Mature Secondary Structure
MLQKFGFSQYESQAYEVVVSSNEPLDATTIVKHSGVPKAKIYEVLARLIDKGMVMDSVSE
CCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
KKKMYTALPLKLAIEKLTTEFQSNIKELETTISKKSFTDDRVWSLKMQSSIRVQSKELIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
NAKESIRISAWNDTLLEYLPLLEEKAKQGVKTESLIVGKVETDLENMHFLIPAEEPNALE
HHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCEEEEECCCCCHHH
RYLLLIVDDREILFAGVEQESWQAMKTMSQPFVKFFTEFFYHDVALAKITQKHHDLFMED
HEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EEIKSLLMKLRY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]