Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
Click here to switch to the map view.
The map label for this gene is yfiS [H]
Identifier: 49187790
GI number: 49187790
Start: 4695183
End: 4696430
Strand: Direct
Name: yfiS [H]
Synonym: BAS4800
Alternate gene names: 49187790
Gene position: 4695183-4696430 (Clockwise)
Preceding gene: 49187789
Following gene: 49187792
Centisome position: 89.8
GC content: 37.82
Gene sequence:
>1248_bases ATGGAGGAACTACAACAAAATAAATCTGCTTTAGAAGGAAGCGGAAAACCGTTATTAAAAAATACGAATTTCCTTTTTCT TTGGGCAGCTACTCTTTTTTCAAGTTTCGCTTTAGCCTTTTTTACTTTTTCACAAACGTGGTACATAGCAAAAACATTAA ACCTTGAGGCATCACTCGGTGTTGTTTTCGTAGCTCTTAGTGTTCCAAGGCTTATTTTTATGATTATCGGCGGCGCTGTA GCTGATAAATTCCCGAAAAAAAACATTATGTTTTATTCTAATATTATTCGTGCTATTCTTGTCGCAACCATCCTTACATG GTTCATTGTAGGTGACGTAACACTATATACATTTGCTTTATTCGCTTTATTCTTTGGGCTTGCTGATGCTTTTTTCTGGT CAGCTGATGGATCTATCTTGCCTGAACTTGTAGAAAAAAGCCGTTTAACACAAGCAAACTCACTTACACAAATGACAAAC CAAGCATCGGTCATATTAGGCCCTGTACTTGGCGGCATTCTTATCAAATTTACGAACTATGAAACGATTTTCTCGATTAC AATTTTATTACTCATTGTCGCAGCCATACTCGTTCAAAAAATACAATTTACGATGCCAGAGCAGCAAAATACAGACAAGG GCATGTTTACTTCTATTAAAGAAGGGATCTTATATGTAAAGGAATCTCCATTCCTTTCAACTTTCCTTATTTGTAGTGCA TTTTTAAACTTATTTTTAATCGGTCCGATGCAAGTCGGTTTCCCGCTTTTCGTTAAAAATGTTCTACACGGTGACTCGCT TCAATTCAGTTACTTAGAAGCGTCTGTCGGCGGCGGAATGGCAATAGGCGCTGTCATTGTCGGTTTAAAAAATATTAATC GTAGACGCGGTCTATTTTGCATTATCATGATGCTGCTATCTGGTGTATTCTTCTTATCTATCAACTTTAGCACTGTACTA TGGCAAGCGTTATTAGCCGGCATGTTTTACGGTATTACAATTGCAATGGCTATCGTTCCGCTTATGGCGATGATTCAATC GACAGTAAAAGAAGAAATGATGGGGCGAGTAATGAGTTTACTTATGCTATCATCAATGGGCTTTATCCCGCTCTCTTATG CATTCACATCAATCGCGCTTGCAATAGGAATTCCAATTGTAACCGTTATGAAAAGTGGTGCAATCGCCGTTATCGTCTTT GTACTATTTGTAGCGATTCGCGTTCCAGTTGTAAGAAAGTTTGATTAA
Upstream 100 bases:
>100_bases GTCTACAATGAGAAAGTGCAGTATAGAAATATTAGAAACTGTATAAATTGATTGTTAACAAGTTTTTTAGTTTAAATTTG TCACATAGAAAGGAAGCAAT
Downstream 100 bases:
>100_bases CTACTTGGAGTCATGCATTTACGCATGGCTCCTTTTTAAACGGATCAAATAACGATATCCCCTTACTTCTTCTCAGTGCT GCTCCCCATTCTAATCCAAC
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF VLFVAIRVPVVRKFD
Sequences:
>Translated_415_residues MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF VLFVAIRVPVVRKFD >Mature_415_residues MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF VLFVAIRVPVVRKFD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45613; Mature: 45613
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLG CCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH VVFVALSVPRLIFMIIGGAVADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTNQASVILGPVLGGILIKFTNY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCH ETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEECCCHHHHHHHHHH FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFC HHHHHHHCCHHHCHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH IIMMLLSGVFFLSINFSTVLWQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVFVLFVAIRVPVVRKFD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLG CCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH VVFVALSVPRLIFMIIGGAVADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTNQASVILGPVLGGILIKFTNY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCH ETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEECCCHHHHHHHHHH FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFC HHHHHHHCCHHHCHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH IIMMLLSGVFFLSINFSTVLWQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVFVLFVAIRVPVVRKFD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]