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The map label for this gene is yxdM [H]

Identifier: 49187723

GI number: 49187723

Start: 4615139

End: 4615846

Strand: Direct

Name: yxdM [H]

Synonym: BAS4732

Alternate gene names: 49187723

Gene position: 4615139-4615846 (Clockwise)

Preceding gene: 49187722

Following gene: 49187724

Centisome position: 88.27

GC content: 32.34

Gene sequence:

>708_bases
ATGACATTTTGGCAATTTGCATTTAAAAATGTCTCGCGTAATTCCAAAGCATATTTCGCTTATTTTGTGAGTAGCGCGTT
TTCGATCATGGTTTTCTTTTCATTTACTGTATACGCGTATCATCCACGCTTACAAATTATGAATAAATTACAGGAACAAG
ATCCATTGATGAACTTAGCCGGCATGGCACAGTTTGTTATCGTTTTGTTCTCGTTCTTCTTTCTCTTATATTCTATTGGG
ACGTTTTTAAATGTACGGAAGCAACAATTTGGCGTTTTAACTGTTCTCGGTATATCTCAAAAACAATTAAAACGTCTTTT
GTTTACTGAAAATATGATTATTGGAATGCTTGCTATCTTTGCAGGTATTCAAGGCGGTCTCGTGTTCTCTAACTTTTTCT
TACTCGTTACTTCTAAATTAACAAATGCAAAAGGCCTCTATTTATATTGGCCAACAGAAGCTATTATCGTTACAACAATA
ACTTTTATTATTTTATTTTTCATCGTCTCTACATTTACACCAATGTTCATTCGTACTCGGAAAACAACTCGATTACTTAA
AAATAATAAAAAAGAAAAAAGCGAAAAAAGACCGTCTATACTCATTTCATTATTTGCTTTAATTTGTTTAGGGCTATGCT
ATTATATCGCTGGTTATCCGCAAGGCTATATAACAGAAAAAATGTACAAAATGGATCTGTATTCTTAA

Upstream 100 bases:

>100_bases
AAGATGGGGAGCTTTACAACGAACTGCACCGAGGATTGTATCGTGAGAAGTTTTATCAAGAAATATTAGATGTTTTAGCA
TTACTAGGAGGAAGACGTGG

Downstream 100 bases:

>100_bases
TTATGCTATCTATTTTACCGCTCGTAGTGGTGGGAACATATTTATTCTTTTCACAAACGTTTCTTCTCTTTATCTTTATT
TTGAAAAAGCGGAGAAAGTT

Product: ABC transporter permease, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTFWQFAFKNVSRNSKAYFAYFVSSAFSIMVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIG
TFLNVRKQQFGVLTVLGISQKQLKRLLFTENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTI
TFIILFFIVSTFTPMFIRTRKTTRLLKNNKKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS

Sequences:

>Translated_235_residues
MTFWQFAFKNVSRNSKAYFAYFVSSAFSIMVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIG
TFLNVRKQQFGVLTVLGISQKQLKRLLFTENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTI
TFIILFFIVSTFTPMFIRTRKTTRLLKNNKKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS
>Mature_234_residues
TFWQFAFKNVSRNSKAYFAYFVSSAFSIMVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGT
FLNVRKQQFGVLTVLGISQKQLKRLLFTENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTIT
FIILFFIVSTFTPMFIRTRKTTRLLKNNKKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 27247; Mature: 27116

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWQFAFKNVSRNSKAYFAYFVSSAFSIMVFFSFTVYAYHPRLQIMNKLQEQDPLMNLA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHH
GMAQFVIVLFSFFFLLYSIGTFLNVRKQQFGVLTVLGISQKQLKRLLFTENMIIGMLAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTITFIILFFIVSTFTPMFIRTR
HCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KTTRLLKNNKKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TFWQFAFKNVSRNSKAYFAYFVSSAFSIMVFFSFTVYAYHPRLQIMNKLQEQDPLMNLA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHH
GMAQFVIVLFSFFFLLYSIGTFLNVRKQQFGVLTVLGISQKQLKRLLFTENMIIGMLAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
AGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTITFIILFFIVSTFTPMFIRTR
HCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KTTRLLKNNKKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]