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The map label for this gene is yxdM [H]

Identifier: 49187724

GI number: 49187724

Start: 4615762

End: 4617117

Strand: Direct

Name: yxdM [H]

Synonym: BAS4733

Alternate gene names: 49187724

Gene position: 4615762-4617117 (Clockwise)

Preceding gene: 49187723

Following gene: 49187743

Centisome position: 88.28

GC content: 31.12

Gene sequence:

>1356_bases
TTGTTTAGGGCTATGCTATTATATCGCTGGTTATCCGCAAGGCTATATAACAGAAAAAATGTACAAAATGGATCTGTATT
CTTAATTATGCTATCTATTTTACCGCTCGTAGTGGTGGGAACATATTTATTCTTTTCACAAACGTTTCTTCTCTTTATCT
TTATTTTGAAAAAGCGGAGAAAGTTTTATATGAAGCAAATAAATATGTTATGGATTTCAGATTTAGCTAACCGCACTCGT
AGTAATATTAATGTACTCTTTATCGTTTCTATGCTATCTGCACTTGCATTTACAATTATTATCGCGCTATTTGCTATCAA
TAATAATACGAAAGCAATGATATTAGAACGTTTTCCTATCCCCTTCACATATACATCTAAAGGGGAAAATTCACTTGAAC
AAAAACATATTGCTACAATTGAAATGGAGCTTACAAATGCTAATTTTCAATACAGCAAGCATCAGTCTACATTGTTAAAA
GATACCGCTTTAAAAGAAGACATTACTCTTATGAAAATGAGTGATTATAACACGCTTGCAAAACAATTAAGGAGACCAGA
AATAAATCTTGATTCTACACAAGTTTATATTATTTCTCGTTACTCACCAGAGCTCTTAAATCTTGTATCAAATCCATTCG
CAAAACAAAATACAATTACAATCGGATCTAATAAAAAAGAATTTCACATTAAAGGATTTATTAATAAATCCATTGAACCC
GCCTTCGCATTCCCTTATTTAATGGTTGTACAAGATGATGTATTCAATAATATGATTCCTCATATTGAAACAACCATAGT
GTATAATTACTTCGTTGAAAACTGGGAAAATGCGATTGCTCCTACGAAAAATATATTAAAGCATATTAGAAATGATACAG
ATAACTTCTATGAGGCACACAAAGATGCGGAAGGTAATTTTCAACCCCCATTTAATATTTATACAGCTGCCGATGACCTG
AAATACAGCAAAGGAAATTCAATTGCTACGTTCTTTATTTGGGCATTTCTCGGTTTTATTTTCTTTATCGGTGCGGCTAG
TGTTTTATACTTCCGTATGTATAACGACTTAACAAATGAAAAGCAAAAATATATTACGATTACAAAACTTGGTTTAACAG
AATCAGAAATGTTTCGCTCTGCAACGATTCAATTAGGAATTTTATTTTTCGTTCCTTATATCGTTGCTGGTATTCACACA
TTATTTGCGGTTAAGTTTTTACAAAGCATACTCGCTTTTTCTTTACTAAAAGAGTTATTAATTGTACTCACTTTCTTTGG
GATTATCGAGATTATTTTCTTCTTCTTAATCCGATCTCTGTACATTAATAAATTATCACAGCACATAAAAATATGA

Upstream 100 bases:

>100_bases
TGTTCATTCGTACTCGGAAAACAACTCGATTACTTAAAAATAATAAAAAAGAAAAAAGCGAAAAAAGACCGTCTATACTC
ATTTCATTATTTGCTTTAAT

Downstream 100 bases:

>100_bases
ATAAAATGGCCTTGTGCAATACGCACAAGGCCATTTTCAATAGTTTTTAATTAGCAGCAATATCCACCGTAGCCGCCAGC
ATAACCGCCGTAACCACCAT

Product: ABC transporter permease, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MFRAMLLYRWLSARLYNRKNVQNGSVFLIMLSILPLVVVGTYLFFSQTFLLFIFILKKRRKFYMKQINMLWISDLANRTR
SNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLK
DTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEP
AFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDAEGNFQPPFNIYTAADDL
KYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHT
LFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI

Sequences:

>Translated_451_residues
MFRAMLLYRWLSARLYNRKNVQNGSVFLIMLSILPLVVVGTYLFFSQTFLLFIFILKKRRKFYMKQINMLWISDLANRTR
SNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLK
DTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEP
AFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDAEGNFQPPFNIYTAADDL
KYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHT
LFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI
>Mature_451_residues
MFRAMLLYRWLSARLYNRKNVQNGSVFLIMLSILPLVVVGTYLFFSQTFLLFIFILKKRRKFYMKQINMLWISDLANRTR
SNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLK
DTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEP
AFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDAEGNFQPPFNIYTAADDL
KYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHT
LFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 52454; Mature: 52454

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRAMLLYRWLSARLYNRKNVQNGSVFLIMLSILPLVVVGTYLFFSQTFLLFIFILKKRR
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFYMKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPI
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
PFTYTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLA
CEEECCCCCCHHHHHHEEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEECCHHHHH
KQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEP
HHHCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCC
AFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAH
HHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
KDAEGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNE
CCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KQKYITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELL
CHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLTFFGIIEIIFFFLIRSLYINKLSQHIKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRAMLLYRWLSARLYNRKNVQNGSVFLIMLSILPLVVVGTYLFFSQTFLLFIFILKKRR
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFYMKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPI
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
PFTYTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLA
CEEECCCCCCHHHHHHEEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEECCHHHHH
KQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEP
HHHCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCC
AFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAH
HHHCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
KDAEGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNE
CCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KQKYITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELL
CHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVLTFFGIIEIIFFFLIRSLYINKLSQHIKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]