Click here to switch to the map view.

The map label for this gene is ytmP [H]

Identifier: 49187589

GI number: 49187589

Start: 4496582

End: 4497379

Strand: Reverse

Name: ytmP [H]

Synonym: BAS4596

Alternate gene names: 49187589

Gene position: 4497379-4496582 (Counterclockwise)

Preceding gene: 49187590

Following gene: 49187587

Centisome position: 86.01

GC content: 38.97

Gene sequence:

>798_bases
ATGAATATGGAATGGTTGGAACAATTATTAGGAAAAGAGTGGAGTCTTGTACCGGCTGGTGGAGTAACGGGCGATGCATA
TATTGCGCAAAACGGACAACAGAAGTTATTTTTAAAGCGGAATACATCGCCCTTTTTAGCGGTATTGTCAGCAGAAGGAA
TTGTTCCAAAATTACTTTGGACAAGAAGGGTAACGAACGGTGATGTAATTTCTGCTCAAAAATGGCTTCCGGGACAGAAG
TTAGAGCCAGAGGATATGAAACTAGAACGTGTTGCGAAACTTTTGAAGAAAATACACTCCTCTAAAGCACTTGTGCAGAT
GATTCAGAGACTTGGGAAGCAGCCGCTTCACGCACAAGAGTTATTACAACAACTGCAACTTGTTTTAAGGGGAGATATAA
GGGATGAGGAAACAATTCAGCAAGGTCTTCAATATTTAATGGATTCATTAAAAGATATTGAATACAACGAATTCGTTGTA
TGCCATTGTGATGTAAACCATAACAATTGGCTATTGTCGGATGAAGATGAGTTGTTTTTAATTGATTGGGATGGAGCTGT
AATTGCTGACCCAGCTTTAGACCTCGGTATGTTATTATATTGGTACATTCCGCGCCAAGAATGGAGTGAGTGGCTCGGTT
ATTATGATATTGAAATGGATGAATCACTGCTTAAACGTATGAGATGGTATGTGATAGCGCAAACGATTTTATCTATTCAA
TGGCATACAACAAAAAAGCAGCAAGCAGAAGCTGAATATTGGCATCAATATTTACAGCAACTACTTGCTTCAGAGTAA

Upstream 100 bases:

>100_bases
TTTTCATTTACAGTAAAATATATATGAATCCACAACATGTGTAGAAATGTTGCGGTTTTTCTTTTCATAACTATAAAAGA
TAAGGATTTGTTAACGGGTA

Downstream 100 bases:

>100_bases
TACTTAAGAAAAATTGTCCATTCCAGCAATCCACTGAGTAAGTTGTTCTTGATTATTGGAAATGTGGTTGTCCAAATTAG
AGGAAGATTTACCCGATTGA

Product: aminoglycoside phosphotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNMEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQK
LEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVV
CHCDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQ
WHTTKKQQAEAEYWHQYLQQLLASE

Sequences:

>Translated_265_residues
MNMEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQK
LEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVV
CHCDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQ
WHTTKKQQAEAEYWHQYLQQLLASE
>Mature_265_residues
MNMEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQK
LEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVV
CHCDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQ
WHTTKKQQAEAEYWHQYLQQLLASE

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30997; Mature: 30997

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLW
CCHHHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHH
TRRVTNGDVISAQKWLPGQKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQE
HHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
LLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCHCDVNHNNWLLSDEDELFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEE
IDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQ
EECCCCEEECCHHHHHHHHHHHCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHH
WHTTKKQQAEAEYWHQYLQQLLASE
CCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNMEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLW
CCHHHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHH
TRRVTNGDVISAQKWLPGQKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQE
HHCCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
LLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCHCDVNHNNWLLSDEDELFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEE
IDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQ
EECCCCEEECCHHHHHHHHHHHCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHH
WHTTKKQQAEAEYWHQYLQQLLASE
CCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]