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The map label for this gene is 49187377

Identifier: 49187377

GI number: 49187377

Start: 4294883

End: 4295521

Strand: Reverse

Name: 49187377

Synonym: BAS4382

Alternate gene names: NA

Gene position: 4295521-4294883 (Counterclockwise)

Preceding gene: 49187378

Following gene: 49187375

Centisome position: 82.15

GC content: 30.2

Gene sequence:

>639_bases
ATGAGAAAAGTTGCTTGTGCAAATACTTATATTAATAAAATCAAGCCCGTTATTAGAAAAACGAGTTTTAGCCAATTAAA
AATAGATGAAATTGCGAAATATATGGATATTAGTAAAGCTACTTTATATAAACGTTTTTCTTCAAAAGATGAGATTATCG
AAGCGGTGGTAGAAGATTTTATGAACTACCTTCTTGAAGGAGATGCGTATAATCAAGATGAAAGTATGTCTTTTGCAGAA
CGTTTCCAAAAGACGTTTATTCACTCTTTAAAATGTGTGACGTATATTTCAGATGTCTTTTTACAAGATTTGAAAGAGGC
ATATCCGCACTTATCTGATCAGTTAGTCGCTGCACAACAAAATCGTAATCATAATTTGCAAATCTTTTTTGAAGCTGGTA
TGGAACAAGGCTACTTTAATAAAATGAACGCACAATTATTTATGGTGCAAGATGATGTGATGTTAAGACGTATTATAGAT
CATTCTTTTTGTATTCAGTACGATATTACGTTAAAGAAAGCGATACTTGATTTTTATCAACTAAAGAAGTATCAACTTTT
TAAACCAGAGTATATAGAAGCAATTGATGATTCGGAAATTGAAAAAGAAGTTATTGCTATTTTGCAAATGATTTCGTAA

Upstream 100 bases:

>100_bases
GCCTTAAACTAAAAATATATATTGAGTATAGTGACTTCATTTATAATTAATCGTGAATTTGCTATACTATTTTGTATGGA
CAAAAGGGGAGGCTCTTTTA

Downstream 100 bases:

>100_bases
AAAAGCAGGTTTTCCTATTGTAATGGAAAACCTGCTTTTTTATTACATGTTATTTTTTTGCGTGTTGTAATACTAATTCA
GCTACTGCACCACCTGAAGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDAYNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQIFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEAIDDSEIEKEVIAILQMIS

Sequences:

>Translated_212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDAYNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQIFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEAIDDSEIEKEVIAILQMIS
>Mature_212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDAYNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQIFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEAIDDSEIEKEVIAILQMIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25003; Mature: 25003

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MNYLLEGDAYNQDESMSFAERFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NRNHNLQIFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIIDHSFCIQYDITLKKAILDFYQ
CCCCCEEEEEECCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHEEEECHHHHHHHHHHHH
LKKYQLFKPEYIEAIDDSEIEKEVIAILQMIS
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MNYLLEGDAYNQDESMSFAERFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NRNHNLQIFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIIDHSFCIQYDITLKKAILDFYQ
CCCCCEEEEEECCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHEEEECHHHHHHHHHHHH
LKKYQLFKPEYIEAIDDSEIEKEVIAILQMIS
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA