Click here to switch to the map view.

The map label for this gene is spoIVFA [H]

Identifier: 49187340

GI number: 49187340

Start: 4254931

End: 4255677

Strand: Reverse

Name: spoIVFA [H]

Synonym: BAS4345

Alternate gene names: 49187340

Gene position: 4255677-4254931 (Counterclockwise)

Preceding gene: 49187341

Following gene: 49187339

Centisome position: 81.39

GC content: 34.4

Gene sequence:

>747_bases
ATGAAGAATAGACGTGTAGAAGAAATTAAAAAACGGATTGCGAAGAGGAAGGCAGAGCAAGAAAGGATGGAGGAAGAGCA
GTATTTTGCTGGAGAGAATTTTGATAGTGAAACAGTATTTATTGAAGATGGAGAAAAGGAAATTCATCCTTTATTTCGAA
AAGAAGTGTTTTTCTTCAAAGTATTGTTATCAGCAATATTAGTTCTTTCTGTCGCTATTTTATATAAGAATGCACCTTCT
TCTTTTGACGGTGCGAAAGCTGTTACAGAAAAAGTGATGAAAGAAGAATTTCAATTTGCTACTGTAGCGAAATGGTACGA
AAAACAGTTTGGAAAACCTCTCGTGTTCTATTCGCCTAATGAGAAAAAAGAAGGGAACATTCAGCAAAAAGATTATGCAA
TTCCTGCTTCCGGAAAGGTGATGCAAGGGTTTCAAAAAAATGGCCAAGGTGTATTTGTTCAAACAGCTACAAATGCAACT
GTTGAGTCAGTGAATGAAGGGCTAGTTGTTTTTGCAGGAAAGAAAGAGGAACTTGGTAATACAGTTCAAATTCAGCATGC
AGATGGCACGGAGTCATGGTATGCAAATTTAAATGATATGTCAGTGAAATTATATGATTACGTTTCAAAGAAACAAAAAA
TTGGAACGGTGAGTAATGATACAAACGATAAAAATGGTAAGTTTTATTTCGCAATAAAAAAGGATGAAAAATTTATTGAT
CCCATTCAGGTGATTTCATTTGATTAA

Upstream 100 bases:

>100_bases
TTTCTTCACACGAATATCTTCCTTTCCTAGCTCATACATATGTACAAACTGTATACAACTGTTTCTATGTAAATTAGCTG
AACGAAAGAAAGGAGACAGT

Downstream 100 bases:

>100_bases
ATATAGAGAGGTTTTAACGAAGATTTCAGTTCATCCGTTGTTTTGGGTTATTATTGTCATTGGTATTTTTACAGCACGTT
TTAAAGAGTTACTACTGTTA

Product: stage IV sporulation protein FA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNRRVEEIKKRIAKRKAEQERMEEEQYFAGENFDSETVFIEDGEKEIHPLFRKEVFFFKVLLSAILVLSVAILYKNAPS
SFDGAKAVTEKVMKEEFQFATVAKWYEKQFGKPLVFYSPNEKKEGNIQQKDYAIPASGKVMQGFQKNGQGVFVQTATNAT
VESVNEGLVVFAGKKEELGNTVQIQHADGTESWYANLNDMSVKLYDYVSKKQKIGTVSNDTNDKNGKFYFAIKKDEKFID
PIQVISFD

Sequences:

>Translated_248_residues
MKNRRVEEIKKRIAKRKAEQERMEEEQYFAGENFDSETVFIEDGEKEIHPLFRKEVFFFKVLLSAILVLSVAILYKNAPS
SFDGAKAVTEKVMKEEFQFATVAKWYEKQFGKPLVFYSPNEKKEGNIQQKDYAIPASGKVMQGFQKNGQGVFVQTATNAT
VESVNEGLVVFAGKKEELGNTVQIQHADGTESWYANLNDMSVKLYDYVSKKQKIGTVSNDTNDKNGKFYFAIKKDEKFID
PIQVISFD
>Mature_248_residues
MKNRRVEEIKKRIAKRKAEQERMEEEQYFAGENFDSETVFIEDGEKEIHPLFRKEVFFFKVLLSAILVLSVAILYKNAPS
SFDGAKAVTEKVMKEEFQFATVAKWYEKQFGKPLVFYSPNEKKEGNIQQKDYAIPASGKVMQGFQKNGQGVFVQTATNAT
VESVNEGLVVFAGKKEELGNTVQIQHADGTESWYANLNDMSVKLYDYVSKKQKIGTVSNDTNDKNGKFYFAIKKDEKFID
PIQVISFD

Specific function: Implicated in the coupling of mother cell to forespore gene expression. Required for spore formation at 37 degrees Celsius, but not at 30 degrees Celsius. SpoIVFA plays a central role in both maintaining the SpoIVFA/BofA/SpoIVFB complex and anchoring it t

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Forespore outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 28367; Mature: 28367

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRRVEEIKKRIAKRKAEQERMEEEQYFAGENFDSETVFIEDGEKEIHPLFRKEVFFFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
VLLSAILVLSVAILYKNAPSSFDGAKAVTEKVMKEEFQFATVAKWYEKQFGKPLVFYSPN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
EKKEGNIQQKDYAIPASGKVMQGFQKNGQGVFVQTATNATVESVNEGLVVFAGKKEELGN
CCCCCCCCCCCEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHCCCCEEEEECCHHHCCC
TVQIQHADGTESWYANLNDMSVKLYDYVSKKQKIGTVSNDTNDKNGKFYFAIKKDEKFID
EEEEEECCCCHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
PIQVISFD
CEEEEECC
>Mature Secondary Structure
MKNRRVEEIKKRIAKRKAEQERMEEEQYFAGENFDSETVFIEDGEKEIHPLFRKEVFFFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
VLLSAILVLSVAILYKNAPSSFDGAKAVTEKVMKEEFQFATVAKWYEKQFGKPLVFYSPN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
EKKEGNIQQKDYAIPASGKVMQGFQKNGQGVFVQTATNATVESVNEGLVVFAGKKEELGN
CCCCCCCCCCCEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHCCCCEEEEECCHHHCCC
TVQIQHADGTESWYANLNDMSVKLYDYVSKKQKIGTVSNDTNDKNGKFYFAIKKDEKFID
EEEEEECCCCHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
PIQVISFD
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 8459776 [H]