Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is gcvT
Identifier: 49187128
GI number: 49187128
Start: 4051356
End: 4052456
Strand: Reverse
Name: gcvT
Synonym: BAS4131
Alternate gene names: 49187128
Gene position: 4052456-4051356 (Counterclockwise)
Preceding gene: 49187131
Following gene: 49187127
Centisome position: 77.5
GC content: 37.6
Gene sequence:
>1101_bases ATGATTACATTACAACGTACACCGTTATTTGATGTATACGCGAAGTATGGTGGGAAAACAATCGACTTCGGTGGTTGGGA GTTACCAGTTCAATTTTCAAGCATTAAAGAAGAACATGAAGCTGTACGTACAGCGGCGGGTTTGTTCGATGTGTCTCATA TGGGAGAAGTTGAGGTAAAAGGTGTAGATAGTTTAGCATTTTTACAACGTGTTGTTACAAATGACGTATCTACCTTAAAG GTAGGAGGCGCACAATATACAGCAATGTGCTACGAAAATGGTGGTACAGTAGATGATTTATTAATCTACAAACGTGGTGA AGAAGACTATTTATTAGTTATCAACGCATCAAATATCGAGAAAGATTACGAATGGTTAGCTAGCCATGTAATTGGCGATG CGACAGTAGTCAATGTTTCTAGCGAAGTTGCACAGCTTGCAATTCAAGGACCAAAAGCAGAAGGCATTTTACAAAAAGTT GTGTCAGAAGATTTAAAAGAAATTAAGTTCTTTAAATTTAAAAACGATATTCTTGTAGATGGAATTCCAGCACTTGTATC TCGTACAGGTTACACAGGTGAAGATGGATTTGAAATTTACTGTAAGAGTGAAGATGCAGCAAAACTTTGGGAGAAACTTC TTGAAGTTGGAGCAGAAGAAGGCTTAAAAGCATGTGGTTTAGGTGCTCGTGATACACTTCGCTTCGAAGCAACATTACCA CTTTATGGTCAAGAATTATCAAAAGATATTACACCGATTGAAGCTGGAATTGGCTTTGCGGTAAAAACAAATAAAGAAGC AGACTTCTTTGGAAAAGCAACGTTAAAAGAGCAAAAAGAAAACGGTGCGCCTCGCAAATTAGTCGGCATCGAAGTAATTG AACGTGGAATTCCTCGTACGCATTACCCTGTATTTATTGGAGAAGAAAAGATCGGGGAAGTAACAAGTGGTACACAATCT CCAACGTTAAAGAAAAGCATTGGTTTAGCACTAATTGATGTAAAATACGCAGCAGTTGATACAGAAGTAGAAATTGAAAT TCGTAATAAACGCGTCAAAGCAGTAGTTGTTCCAACACCATTTTATAAACGTTCAAAGTAA
Upstream 100 bases:
>100_bases AATATAATGAGATTCCGTATATCCTATCTTTTTAGAATGAAAATGTTTAGAAAAGAGTAACAACTTTTATTGATTTGTCA GAGCATAAGGGGGAGAGATC
Downstream 100 bases:
>100_bases CGGGGAGAGGGGTAGATTTCATGTTGCATCGTTATCTTCCAATGACAGAAGAAGACAAAAAAGAAATGTTACAAACGATC GGCGTTCAAACGATCGATGA
Product: glycine cleavage system aminomethyltransferase T
Products: NA
Alternate protein names: Glycine cleavage system T protein
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MITLQRTPLFDVYAKYGGKTIDFGGWELPVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLK VGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKV VSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLP LYGQELSKDITPIEAGIGFAVKTNKEADFFGKATLKEQKENGAPRKLVGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQS PTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYKRSK
Sequences:
>Translated_366_residues MITLQRTPLFDVYAKYGGKTIDFGGWELPVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLK VGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKV VSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLP LYGQELSKDITPIEAGIGFAVKTNKEADFFGKATLKEQKENGAPRKLVGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQS PTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYKRSK >Mature_366_residues MITLQRTPLFDVYAKYGGKTIDFGGWELPVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVKGVDSLAFLQRVVTNDVSTLK VGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKV VSEDLKEIKFFKFKNDILVDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLP LYGQELSKDITPIEAGIGFAVKTNKEADFFGKATLKEQKENGAPRKLVGIEVIERGIPRTHYPVFIGEEKIGEVTSGTQS PTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYKRSK
Specific function: The glycine cleavage system catalyzes the degradation of glycine
COG id: COG0404
COG function: function code E; Glycine cleavage system T protein (aminomethyltransferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gcvT family
Homologues:
Organism=Homo sapiens, GI44662838, Length=370, Percent_Identity=34.5945945945946, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI257796258, Length=356, Percent_Identity=33.9887640449438, Blast_Score=188, Evalue=7e-48, Organism=Homo sapiens, GI24797151, Length=336, Percent_Identity=30.6547619047619, Blast_Score=175, Evalue=5e-44, Organism=Homo sapiens, GI257796254, Length=363, Percent_Identity=32.5068870523416, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI257796256, Length=318, Percent_Identity=32.3899371069182, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI197927446, Length=308, Percent_Identity=26.2987012987013, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI21361378, Length=308, Percent_Identity=26.2987012987013, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI194306651, Length=317, Percent_Identity=25.2365930599369, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1789272, Length=373, Percent_Identity=36.4611260053619, Blast_Score=238, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17560118, Length=371, Percent_Identity=36.3881401617251, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71994045, Length=374, Percent_Identity=25.9358288770053, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994052, Length=374, Percent_Identity=25.9358288770053, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI32563613, Length=341, Percent_Identity=26.3929618768328, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320222, Length=389, Percent_Identity=35.2185089974293, Blast_Score=206, Evalue=3e-54, Organism=Drosophila melanogaster, GI20129441, Length=375, Percent_Identity=35.2, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI28571104, Length=272, Percent_Identity=29.4117647058824, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI20130091, Length=367, Percent_Identity=24.2506811989101, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GCST_BACAA (C3P8D5)
Other databases:
- EMBL: CP001598 - RefSeq: YP_002868518.1 - ProteinModelPortal: C3P8D5 - SMR: C3P8D5 - EnsemblBacteria: EBBACT00000129700 - GeneID: 7848034 - GenomeReviews: CP001598_GR - KEGG: bai:BAA_4467 - GeneTree: EBGT00050000001932 - ProtClustDB: PRK00389 - GO: GO:0005737 - HAMAP: MF_00259 - InterPro: IPR013977 - InterPro: IPR006222 - InterPro: IPR006223 - InterPro: IPR022903 - PIRSF: PIRSF006487 - TIGRFAMs: TIGR00528
Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C
EC number: =2.1.2.10
Molecular weight: Translated: 40225; Mature: 40225
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLQRTPLFDVYAKYGGKTIDFGGWELPVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVK CEEECCCCHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIE CCHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCC KDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVD HHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEC GIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLP CHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCHHCCHHHCCCCCCCEEEEEEECC LYGQELSKDITPIEAGIGFAVKTNKEADFFGKATLKEQKENGAPRKLVGIEVIERGIPRT CCHHHHCCCCCCHHHCCEEEEECCCCCCHHCCHHHHHHHHCCCCCEEEHHHHHHCCCCCC HYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTP CCCEEECCHHHCCCCCCCCCCCHHHHCCEEEEEEEEEEECCEEEEEEECCEEEEEEECCC FYKRSK CCCCCC >Mature Secondary Structure MITLQRTPLFDVYAKYGGKTIDFGGWELPVQFSSIKEEHEAVRTAAGLFDVSHMGEVEVK CEEECCCCHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GVDSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIE CCHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCC KDYEWLASHVIGDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKNDILVD HHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEC GIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLP CHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCHHCCHHHCCCCCCCEEEEEEECC LYGQELSKDITPIEAGIGFAVKTNKEADFFGKATLKEQKENGAPRKLVGIEVIERGIPRT CCHHHHCCCCCCHHHCCEEEEECCCCCCHHCCHHHHHHHHCCCCCEEEHHHHHHCCCCCC HYPVFIGEEKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTP CCCEEECCHHHCCCCCCCCCCCHHHHCCEEEEEEEEEEECCEEEEEEECCEEEEEEECCC FYKRSK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA