Click here to switch to the map view.

The map label for this gene is efp

Identifier: 49187099

GI number: 49187099

Start: 4031362

End: 4031919

Strand: Reverse

Name: efp

Synonym: BAS4101

Alternate gene names: 49187099

Gene position: 4031919-4031362 (Counterclockwise)

Preceding gene: 49187100

Following gene: 49187096

Centisome position: 77.11

GC content: 39.25

Gene sequence:

>558_bases
ATGATTTCAGTAAACGATTTTCGTACAGGTTTAACAATTGCAGTGGATAATGGCCTTTGGCAAGTACTTGATTTCCAACA
CGTAAAGCCAGGTAAAGGTGCTGCATTCGTTCGTTCTAAACTACGTAACCTTCGCACAGGTTCTGTTCAAGAGAAAACAT
TCCGTGCTGGTGAGAAAGTAGAAAAAGCACACATCGAAAACCGTCGTATGCAATACTTATACGCAAGCGGTGAGGCTCAT
GTATTTATGGATAACGGAACTTATGAGCAAATCGAACTTGGTGAAAAACAAATCGAGCGCGAGCTTAAATTCCTAAAAGA
AAACATGGAAGTATCTATTATGACTTACCAAGGCGAAGTACTTGGTGTTGAACTTCCAAACACAGTTGAATTACAAGTTA
CAGAAACAGAGCCAGGTATTAAAGGTGATACTGCTTCTAACGTAACAAAACCAGCTACATTAGAAACTGGTCTTGTTGTA
CAAGTACCAATCTTTATTAACGAAGGCGAAATGCTTATCATCAACACTGGTGAAGGTAAATACGTTTCTCGTGCATAG

Upstream 100 bases:

>100_bases
TATTGAAGATGATATCATTGTGACAAGTGAAGGTAATGAAGTAATTACGAAATCACCAAAAGAACTTATTATTTTGTAAT
ACACAGGAGGATTTTTTTAC

Downstream 100 bases:

>100_bases
TAAAAAAGCACTCGTGATCATCACGAGTGCTTTTTTTATAGGAAATAGGGCAGATAATAAATAGTGGTTATTATAAAACT
GAAAGCTGTAAGACTAGCTG

Product: elongation factor P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVEKAHIENRRMQYLYASGEAH
VFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEVLGVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVV
QVPIFINEGEMLIINTGEGKYVSRA

Sequences:

>Translated_185_residues
MISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVEKAHIENRRMQYLYASGEAH
VFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEVLGVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVV
QVPIFINEGEMLIINTGEGKYVSRA
>Mature_185_residues
MISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVEKAHIENRRMQYLYASGEAH
VFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEVLGVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVV
QVPIFINEGEMLIINTGEGKYVSRA

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=180, Percent_Identity=45, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=35.978835978836, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_BACAA (C3P7X5)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868490.1
- ProteinModelPortal:   C3P7X5
- SMR:   C3P7X5
- EnsemblBacteria:   EBBACT00000130221
- GeneID:   7849433
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_4437
- GeneTree:   EBGT00050000003049
- ProtClustDB:   PRK00529
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 20692; Mature: 20692

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKV
CCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHH
EKAHIENRRMQYLYASGEAHVFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEV
HHHHHCCCEEEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCEE
LGVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVVQVPIFINEGEMLIINTGEGK
EEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCEEEEECCCCC
YVSRA
EEECC
>Mature Secondary Structure
MISVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKV
CCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHH
EKAHIENRRMQYLYASGEAHVFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEV
HHHHHCCCEEEEEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCEE
LGVELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVVQVPIFINEGEMLIINTGEGK
EEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCEEEEECCCCC
YVSRA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA