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The map label for this gene is yxdM [H]

Identifier: 49184869

GI number: 49184869

Start: 1881378

End: 1882028

Strand: Direct

Name: yxdM [H]

Synonym: BAS1857

Alternate gene names: 49184869

Gene position: 1881378-1882028 (Clockwise)

Preceding gene: 49184868

Following gene: 49184870

Centisome position: 35.98

GC content: 32.57

Gene sequence:

>651_bases
TTGCCGCATTTGAATGAACGATTAAAAGTGAAAAAAATTAATACGTCTTCATTAAGTAAAATAATAAGAGGTAACGTTTA
TGTAATCTCTAACAAGCAGTATGATGCATTACAAGATGGATTTAAAGAGGAAAAAAATTATGTATACAAAACAGAAGGAA
CGAAAGATGAAATTGAGGTTGGTAAAGAACTAACACATCAGATGAAACCTTATGAAGAACATGCAACGTTTAGTGCAGAA
GAGTACGCACAAAACCAAAGTTTACAAATTGCAGGACCAATTCTATTTGTAGGTTTCTTTATCGGTATTGTATTTTTCGT
ATGTGCAGGAAGCTTCCTTTATTTCCGTTTGTTTTCTGATTTGGAGGATGATACTCGTTTGTTTGAAATGATTCGAAAAG
TAGGTTTAACGAGTAGAGAATTATCGAAAGTAGTTACAATTCGATTGGCGCTTTTATTCTTTGTTCCAATAGGTGTTGCA
ACATTACACGGGGCAGTAGCGTTAACTGCACTCGGGCAGATGTTTGAGTACTCACTATTTAAAGAAAATACGATTGTATT
AAGTATTTTCGTAGGAATTCAAGTTGTATATTTCTTACTGATTCGATCTCGTTATTTAAAACAATTGAAAGAGAGATTAT
ATATTCGTTAA

Upstream 100 bases:

>100_bases
CGAAGTTAACAGGAGAACCCTTTCATGCGGTATCAAAAAAAGAAGTTTTATTTTTGTCAGTTGATATACCAGGACCACCG
ATGAAAGAAAAGAAATTACG

Downstream 100 bases:

>100_bases
ATGTGTTTTTTTAACTTGAGTACAAAATTTTCTAAAAAGAGGCAGGTATTACCAAAAAGTGATAAAATGGAAAAAGCGAG
GTGGAAAATTTAATAAAAAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPHLNERLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKPYEEHATFSAE
EYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSRELSKVVTIRLALLFFVPIGVA
TLHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR

Sequences:

>Translated_216_residues
MPHLNERLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKPYEEHATFSAE
EYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSRELSKVVTIRLALLFFVPIGVA
TLHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR
>Mature_215_residues
PHLNERLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEVGKELTHQMKPYEEHATFSAEE
YAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSDLEDDTRLFEMIRKVGLTSRELSKVVTIRLALLFFVPIGVAT
LHGAVALTALGQMFEYSLFKENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 24904; Mature: 24773

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLNERLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEV
CCCCCCCCEEEECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHH
GKELTHQMKPYEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSD
HHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEDDTRLFEMIRKVGLTSRELSKVVTIRLALLFFVPIGVATLHGAVALTALGQMFEYSLF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PHLNERLKVKKINTSSLSKIIRGNVYVISNKQYDALQDGFKEEKNYVYKTEGTKDEIEV
CCCCCCCEEEECCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCEEEECCCCHHHHHH
GKELTHQMKPYEEHATFSAEEYAQNQSLQIAGPILFVGFFIGIVFFVCAGSFLYFRLFSD
HHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEDDTRLFEMIRKVGLTSRELSKVVTIRLALLFFVPIGVATLHGAVALTALGQMFEYSLF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KENTIVLSIFVGIQVVYFLLIRSRYLKQLKERLYIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]