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The map label for this gene is yxdM [H]

Identifier: 49184868

GI number: 49184868

Start: 1880152

End: 1881390

Strand: Direct

Name: yxdM [H]

Synonym: BAS1856

Alternate gene names: 49184868

Gene position: 1880152-1881390 (Clockwise)

Preceding gene: 49184866

Following gene: 49184869

Centisome position: 35.96

GC content: 33.74

Gene sequence:

>1239_bases
ATGAATATTAGAGAACTCGCATTTCGGAATGTGACGCGAAATAGACGAACATATTCAGCATATTTTTTAAGTAGTGCATT
TGCTATTATGGCCTTTTTTGTTTATTCGTTTTTTGCGTTTCATCCGGCATTAAGCGCTGGAGAATTGGGACGATATGTGT
TCGTAAGTATGTCTTTTGCACAGTCCATTATTTACTTATTTACATTTTTCTTTATTTTATATTCGATGGGAATGTTTTTA
AAAACGAGAAAGCGTGAATTAGGAATTTTAATGATGTTAGGTATGACGAAATATCAATTAAAGCGTCTTATCTTTTTTGA
AAATATTATGATTGGAATAGGGGCAATTATTTTTGGGATACTTGCTGGAATGCTATTTTCCGGAATATTAATATTTATAG
CTCCAACGATATTAAAGTTAGATATTTCATTACCCTATTACATTCCAATGAAAGCTATTGTTGTAACGAGTATTATGTTT
TTCGTATTATTTATGATTATTTCATTGTTTAGTGCAGGAATGATTCGGAAGAATAAAATTATGAAATTGTTTAGAGGATC
GGCAGAAGCGAAGCCGGAACCGAAAGCATCCATTATTTCTTCTATATTAGCAGTTATATTGCTTAGTGCGGGATATGCAG
GAGCACTTATGTCACACGGTGCAATGGTATTTATCATGATGATTCCTGTTACAACGGTAGTCATTATTGGTACGTATTTG
CTGTATAAGCAGTTGAGTGTCTTTATTATTAGACTGTGTAAAAAAAGTAAACGTTTCTATTGGACACAGACAAATATTAT
TACGTTGTCAGATTTAGCTTACCGTATGAGAGATAACGCAAGAATGTTCTTTATTGTAACCATCATTTCTACTGTAGCAT
TTTCAGCAATAGGTACATTAGTTGGCTTTACATCAATGACAAAGGCGGTTATGGAGAGACCAATTGCGTTTCACTATCAT
TCTAAGCAAGGAAATAGTAATGAATCACAGCATTTGAAGATGATTGACGAAGGATTAAAGAAACATAGTATAGAGGCTTC
AAAAACTAATATTTCGACGAAGAAAACGGAGGAGCAGTCGTTAAGAAGCGCCACGTTTATAAAGGAATCAGACTATAAGG
AATATGCGAAGTTAACAGGAGAACCCTTTCATGCGGTATCAAAAAAAGAAGTTTTATTTTTGTCAGTTGATATACCAGGA
CCACCGATGAAAGAAAAGAAATTACGTTGCCGCATTTGA

Upstream 100 bases:

>100_bases
CCTTTCAACAATGTAAGGTTTTTGTCATTTGAATCGATGGAAGGTATTTCCGTACTTTACTAATATAAGAACATAGTTAG
TAGAAGGGCGGAGAAGTAAT

Downstream 100 bases:

>100_bases
ATGAACGATTAAAAGTGAAAAAAATTAATACGTCTTCATTAAGTAAAATAATAAGAGGTAACGTTTATGTAATCTCTAAC
AAGCAGTATGATGCATTACA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNIRELAFRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPTILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAVMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIEASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHAVSKKEVLFLSVDIPG
PPMKEKKLRCRI

Sequences:

>Translated_412_residues
MNIRELAFRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPTILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAVMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIEASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHAVSKKEVLFLSVDIPG
PPMKEKKLRCRI
>Mature_412_residues
MNIRELAFRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFAQSIIYLFTFFFILYSMGMFL
KTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGILAGMLFSGILIFIAPTILKLDISLPYYIPMKAIVVTSIMF
FVLFMIISLFSAGMIRKNKIMKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTLVGFTSMTKAVMERPIAFHYH
SKQGNSNESQHLKMIDEGLKKHSIEASKTNISTKKTEEQSLRSATFIKESDYKEYAKLTGEPFHAVSKKEVLFLSVDIPG
PPMKEKKLRCRI

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 46814; Mature: 46814

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRELAFRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGILIFIAPTILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
VGFTSMTKAVMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIEASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH
LRSATFIKESDYKEYAKLTGEPFHAVSKKEVLFLSVDIPGPPMKEKKLRCRI
HHHHHHHHHCCHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIRELAFRNVTRNRRTYSAYFLSSAFAIMAFFVYSFFAFHPALSAGELGRYVFVSMSFA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHH
QSIIYLFTFFFILYSMGMFLKTRKRELGILMMLGMTKYQLKRLIFFENIMIGIGAIIFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMLFSGILIFIAPTILKLDISLPYYIPMKAIVVTSIMFFVLFMIISLFSAGMIRKNKI
HHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKLFRGSAEAKPEPKASIISSILAVILLSAGYAGALMSHGAMVFIMMIPVTTVVIIGTYL
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LYKQLSVFIIRLCKKSKRFYWTQTNIITLSDLAYRMRDNARMFFIVTIISTVAFSAIGTL
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
VGFTSMTKAVMERPIAFHYHSKQGNSNESQHLKMIDEGLKKHSIEASKTNISTKKTEEQS
HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH
LRSATFIKESDYKEYAKLTGEPFHAVSKKEVLFLSVDIPGPPMKEKKLRCRI
HHHHHHHHHCCHHHHHHHCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]