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The map label for this gene is sap [H]

Identifier: 49184799

GI number: 49184799

Start: 1813159

End: 1814193

Strand: Reverse

Name: sap [H]

Synonym: BAS1787

Alternate gene names: 49184799

Gene position: 1814193-1813159 (Counterclockwise)

Preceding gene: 49184809

Following gene: 49184796

Centisome position: 34.7

GC content: 32.85

Gene sequence:

>1035_bases
GTGAGAAACTATTGTTTTATATACTTAGGAGGAATCATAATGAATTTTAAACATGTACTTGCAACAGGCTTAATTACCGC
CACATTATTTGGTGCAACGAACGCTCATGCGCAAACTGAACATTTCATTGATGTACCAACGAATCACTGGTCTAAAGATT
CGATTGACCATTTAACTGAGCAAAAGATTATTAGTGGTTATGGTAACGGAAAATTTGGATTTGGGGACAATGTAACTCGT
GGGCAAGTGGCTGCGATTATTTCAAGATACTTAAAACTAGAAAATACCGGATCTACAAATAAACATTTCTCTGATATTCA
TGGGCATATGTTTGAAAACAATATTAAAGCAGTTGCTCAAAAAGGACTTATGACAGGGGACAATAGCACTGACAAGTTTA
GACCTGATGATACATTAACTCGATATGAAATGGCTGTTATTTTACAAAAAGCTTTTCATTTACCTGTAAAAACAAATGAC
CTTTTCTATGATGTTCCAAATAATTTTTGGGCAACAGACTCTGTTCGTTCATTGTATAGTAATGGCATTACAAAAGGGAT
TGGAAACTATCAATATGGCGGAGAAATGAATGTAACAAGAGAACAATTTGCAACGTTTATGTATAAAGCAATTAATGTAA
GCCCTTATTTTATTCCTGATTCTATTCCTGCAAAAGATGAGGATAAGTACAAAGAAATTGAGAATATACTAATTGATTCT
GGGTTTTTAAAAACCGATTATAACTATGTATTCACTAAAACTGGTCAAACATATGATGGCATTATGCATTTTAATTTTTC
TCCCTATGATGACAGTGCATATAGAATGTCTATTCATAGTGATGATCCTGTATTAAACGAGCCGGTGAAAAAAATTCTCA
ATACACTACTACCAACTAAAGCAGATTATCTGTATAGTCTAATTAAAAATCCTACTGCAAGCTCTCGAACAATAGAATTA
GATGGTCGCAAAATTGAATTTAGTAGAGACTCTAGTACTAGTGTAAATGTTTATCTTGGAAAACGAAAATACTAA

Upstream 100 bases:

>100_bases
TACATTTAAGCAATATTATGAAAGTAAATCCATATTTTACAAAACCGTAATATAGTAATATAATATATAATTGATTATCA
CTTATAAGCATCGGATATGA

Downstream 100 bases:

>100_bases
AAGAGTGACTATTTAACATGAATACAAGTAGCTAAATGGTTACTCATAAGAAATAAAAAGGCTGCCCACAAGTCGGTTTC
ACCGACTTGTGGGCAGCTAC

Product: S-layer protein

Products: NA

Alternate protein names: Surface array protein; Surface layer protein [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRNYCFIYLGGIIMNFKHVLATGLITATLFGATNAHAQTEHFIDVPTNHWSKDSIDHLTEQKIISGYGNGKFGFGDNVTR
GQVAAIISRYLKLENTGSTNKHFSDIHGHMFENNIKAVAQKGLMTGDNSTDKFRPDDTLTRYEMAVILQKAFHLPVKTND
LFYDVPNNFWATDSVRSLYSNGITKGIGNYQYGGEMNVTREQFATFMYKAINVSPYFIPDSIPAKDEDKYKEIENILIDS
GFLKTDYNYVFTKTGQTYDGIMHFNFSPYDDSAYRMSIHSDDPVLNEPVKKILNTLLPTKADYLYSLIKNPTASSRTIEL
DGRKIEFSRDSSTSVNVYLGKRKY

Sequences:

>Translated_344_residues
MRNYCFIYLGGIIMNFKHVLATGLITATLFGATNAHAQTEHFIDVPTNHWSKDSIDHLTEQKIISGYGNGKFGFGDNVTR
GQVAAIISRYLKLENTGSTNKHFSDIHGHMFENNIKAVAQKGLMTGDNSTDKFRPDDTLTRYEMAVILQKAFHLPVKTND
LFYDVPNNFWATDSVRSLYSNGITKGIGNYQYGGEMNVTREQFATFMYKAINVSPYFIPDSIPAKDEDKYKEIENILIDS
GFLKTDYNYVFTKTGQTYDGIMHFNFSPYDDSAYRMSIHSDDPVLNEPVKKILNTLLPTKADYLYSLIKNPTASSRTIEL
DGRKIEFSRDSSTSVNVYLGKRKY
>Mature_344_residues
MRNYCFIYLGGIIMNFKHVLATGLITATLFGATNAHAQTEHFIDVPTNHWSKDSIDHLTEQKIISGYGNGKFGFGDNVTR
GQVAAIISRYLKLENTGSTNKHFSDIHGHMFENNIKAVAQKGLMTGDNSTDKFRPDDTLTRYEMAVILQKAFHLPVKTND
LFYDVPNNFWATDSVRSLYSNGITKGIGNYQYGGEMNVTREQFATFMYKAINVSPYFIPDSIPAKDEDKYKEIENILIDS
GFLKTDYNYVFTKTGQTYDGIMHFNFSPYDDSAYRMSIHSDDPVLNEPVKKILNTLLPTKADYLYSLIKNPTASSRTIEL
DGRKIEFSRDSSTSVNVYLGKRKY

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR008964
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02368 Big_2; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 39044; Mature: 39044

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYCFIYLGGIIMNFKHVLATGLITATLFGATNAHAQTEHFIDVPTNHWSKDSIDHLTE
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
QKIISGYGNGKFGFGDNVTRGQVAAIISRYLKLENTGSTNKHFSDIHGHMFENNIKAVAQ
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KGLMTGDNSTDKFRPDDTLTRYEMAVILQKAFHLPVKTNDLFYDVPNNFWATDSVRSLYS
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
NGITKGIGNYQYGGEMNVTREQFATFMYKAINVSPYFIPDSIPAKDEDKYKEIENILIDS
CCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCC
GFLKTDYNYVFTKTGQTYDGIMHFNFSPYDDSAYRMSIHSDDPVLNEPVKKILNTLLPTK
CEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCH
ADYLYSLIKNPTASSRTIELDGRKIEFSRDSSTSVNVYLGKRKY
HHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCC
>Mature Secondary Structure
MRNYCFIYLGGIIMNFKHVLATGLITATLFGATNAHAQTEHFIDVPTNHWSKDSIDHLTE
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
QKIISGYGNGKFGFGDNVTRGQVAAIISRYLKLENTGSTNKHFSDIHGHMFENNIKAVAQ
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KGLMTGDNSTDKFRPDDTLTRYEMAVILQKAFHLPVKTNDLFYDVPNNFWATDSVRSLYS
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHH
NGITKGIGNYQYGGEMNVTREQFATFMYKAINVSPYFIPDSIPAKDEDKYKEIENILIDS
CCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCC
GFLKTDYNYVFTKTGQTYDGIMHFNFSPYDDSAYRMSIHSDDPVLNEPVKKILNTLLPTK
CEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCH
ADYLYSLIKNPTASSRTIELDGRKIEFSRDSSTSVNVYLGKRKY
HHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836294; 12721629 [H]