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The map label for this gene is yoaR [H]

Identifier: 49183596

GI number: 49183596

Start: 617177

End: 618439

Strand: Reverse

Name: yoaR [H]

Synonym: BAS0571

Alternate gene names: 49183596

Gene position: 618439-617177 (Counterclockwise)

Preceding gene: 49183597

Following gene: 49183593

Centisome position: 11.83

GC content: 33.1

Gene sequence:

>1263_bases
ATGAAGCTAAGTAAAATACTGATCGGTTCTGCAATTGCTGGAGGCATATTACTTTGTGTAGGCGGTGTTAGTGGATATCA
ATATGTATCCAAACTAAATAATCAATTAGATACTACTGCATTACCAAATACTACATTTGAAGGTATTTCTCTCGATGGAA
AAAATAAAAAAGATATTCAAGCTATTATTAATCAAAAAATAACTGAACTAGATCAAAAATCACTTACGTACATATTCCAA
AATGATAAACAAACTTATACATGGAAAGATTTAGGGATAAATTATAAAGAAAAAGATATTATCGACAAAATCTTTAAAGA
GCAAGAAGGAAACGCAATAAATCGTTACAAAATGCGGAAGCAGGCTGAAAACGGTGAATTAAAACGCGACTATAAATTAA
CACCTCAATTAAATACAACTGCTTATGAAAGCTTTATGAAGGATAAATATAATAAAACATTAAAAAATCCTGTTAATGCA
GAATTAAGTATTGAAGGCACTACAGTAAATATTAGCCAAAGTCAAAATGGAGAAAAAATCGATAAAGGAAAGCTAACTGA
TTTAACGAAACAGGCCATTACTTCTGGCACATCTGACATTACGTTACCAGTTACACTATTAAAACCTGAACGCTCTACAG
AAGATATACAGAAAATGGGAATTAAAGAAGTAATCGCTGAATATTCGACTCCAATGGCTGGTCGTAACGGGAATCAATCC
TTTAACGTAAATAAGTCAGCTAATACTTTAAGTGGCGTTATTGTCGCACCTGATGAAACGTTTAGTTTTAATGGCCGCGT
TGGCGTAACGGATGCTGCACATGGTTATAAATCCGCAGCCGTATATTCACAAGGTAAGGTTATACAAAGTGCAGGCGGAG
GCGTTTGCCAAGTTAGTAGTACTTTATATAGCGCAGCTTTAAGAGCAGATTTAGGAATTGTTTCTCGAAGCAATCATTCT
ATGCCCGTAAATTATTTACCACTTGGGCAAGATGCAGCAGTGGCAGATTATGGTCCGGATTTAAAATTTAAAAACAATAC
AGGCAATCATATTTATATTCAAGCATTTTCAAATGGAGGTAGTATTACTACACGTATTTTTGGTACAAATACTGGTAAAA
ATGTTGAAGTTTCTTCTCAAGTAATTAGTAGAACTAATGATAAAATAACAGCAGTTACGTATAAAAAAGTAACACAAAAC
GGTGAAGTAATATCTAATGGCCAAATTTCAAAAAGCGTATATAAAAGTGCTCCAAAACAATAA

Upstream 100 bases:

>100_bases
AAAATAATAGTATACTAGTACGTACATAATGTTATTTTCATCATTTTTATACAAAAAATGTAATACATATATTTATACAA
AAATTTCTGGGGGGAAATAA

Downstream 100 bases:

>100_bases
GACCCCATTAAAAGAACACATTTCAAAAAAGAAAAAGGCGTGAGTAAATCACGCCTTTTTCTTTTGCAATAATACTAAAA
AGGTTGTAAGATGATCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKLSKILIGSAIAGGILLCVGGVSGYQYVSKLNNQLDTTALPNTTFEGISLDGKNKKDIQAIINQKITELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNAINRYKMRKQAENGELKRDYKLTPQLNTTAYESFMKDKYNKTLKNPVNA
ELSIEGTTVNISQSQNGEKIDKGKLTDLTKQAITSGTSDITLPVTLLKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTNDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKQ

Sequences:

>Translated_420_residues
MKLSKILIGSAIAGGILLCVGGVSGYQYVSKLNNQLDTTALPNTTFEGISLDGKNKKDIQAIINQKITELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNAINRYKMRKQAENGELKRDYKLTPQLNTTAYESFMKDKYNKTLKNPVNA
ELSIEGTTVNISQSQNGEKIDKGKLTDLTKQAITSGTSDITLPVTLLKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTNDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKQ
>Mature_420_residues
MKLSKILIGSAIAGGILLCVGGVSGYQYVSKLNNQLDTTALPNTTFEGISLDGKNKKDIQAIINQKITELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNAINRYKMRKQAENGELKRDYKLTPQLNTTAYESFMKDKYNKTLKNPVNA
ELSIEGTTVNISQSQNGEKIDKGKLTDLTKQAITSGTSDITLPVTLLKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTNDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 45725; Mature: 45725

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKILIGSAIAGGILLCVGGVSGYQYVSKLNNQLDTTALPNTTFEGISLDGKNKKDIQ
CCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHH
AIINQKITELDQKSLTYIFQNDKQTYTWKDLGINYKEKDIIDKIFKEQEGNAINRYKMRK
HHHHHHHHHHHHHHEEEEEECCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QAENGELKRDYKLTPQLNTTAYESFMKDKYNKTLKNPVNAELSIEGTTVNISQSQNGEKI
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEECCCCCCCCC
DKGKLTDLTKQAITSGTSDITLPVTLLKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCHHHHHHHHCCCCCCCCCCCC
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSS
EECCCCCCCEEEEEECCCCCEECCCEECCCCCCCCCCHHEEECCCCEEECCCCCEEEEHH
TLYSAALRADLGIVSRSNHSMPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGG
HHHHHHHHHHHCEEECCCCCCCEEEEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCC
SITTRIFGTNTGKNVEVSSQVISRTNDKITAVTYKKVTQNGEVISNGQISKSVYKSAPKQ
EEEEEEEECCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MKLSKILIGSAIAGGILLCVGGVSGYQYVSKLNNQLDTTALPNTTFEGISLDGKNKKDIQ
CCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHH
AIINQKITELDQKSLTYIFQNDKQTYTWKDLGINYKEKDIIDKIFKEQEGNAINRYKMRK
HHHHHHHHHHHHHHEEEEEECCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QAENGELKRDYKLTPQLNTTAYESFMKDKYNKTLKNPVNAELSIEGTTVNISQSQNGEKI
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEECCCCCCCCC
DKGKLTDLTKQAITSGTSDITLPVTLLKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCHHHHHHHHCCCCCCCCCCCC
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSS
EECCCCCCCEEEEEECCCCCEECCCEECCCCCCCCCCHHEEECCCCEEECCCCCEEEEHH
TLYSAALRADLGIVSRSNHSMPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGG
HHHHHHHHHHHCEEECCCCCCCEEEEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCC
SITTRIFGTNTGKNVEVSSQVISRTNDKITAVTYKKVTQNGEVISNGQISKSVYKSAPKQ
EEEEEEEECCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]