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The map label for this gene is yoeC [H]

Identifier: 49183467

GI number: 49183467

Start: 462667

End: 462888

Strand: Direct

Name: yoeC [H]

Synonym: BAS0439

Alternate gene names: 49183467

Gene position: 462667-462888 (Clockwise)

Preceding gene: 49183466

Following gene: 49183468

Centisome position: 8.85

GC content: 36.49

Gene sequence:

>222_bases
ATGGCATATAAGATATTAAGTGGAGCAGCGGCAGAGTTTGGTTTAGATGAAATAGGGACACATACGCTGAGAAAGACATA
CGGGTATCATATGTACATGCAAACGAAAAACATAGCATTACTCATGGAGATATTCAATCATTCGTCAGAGAAGGTTACAT
TACGTTATATAGGGGTAAACCAAGATGCAATGGATAAAGCAATGACTAGGTTTAAAATCTAA

Upstream 100 bases:

>100_bases
ATCTCTCAAAAGGGAGCTTAAATGGTTTATTGAAGAAAGAGAAGATAATGAGTACCTATTACAAAGTAGATAAGGTAGGA
ATCGTCCAATTGGTCGCAGC

Downstream 100 bases:

>100_bases
GCATTGCTTTTTCTTTTTAAAACTATACACTTACTCATAAATTTCATACTGTGTAACTCAAAAGGGAAAGTTTAATTAAG
TCAATGATACCAAGGGATTT

Product: phage integrase, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAYKILSGAAAEFGLDEIGTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVNQDAMDKAMTRFKI

Sequences:

>Translated_73_residues
MAYKILSGAAAEFGLDEIGTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVNQDAMDKAMTRFKI
>Mature_72_residues
AYKILSGAAAEFGLDEIGTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVNQDAMDKAMTRFKI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 8379; Mature: 8248

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKILSGAAAEFGLDEIGTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVN
CCEECCCCCCCCCCHHHHCHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCEEEEEEEECC
QDAMDKAMTRFKI
HHHHHHHHHHCCC
>Mature Secondary Structure 
AYKILSGAAAEFGLDEIGTHTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVTLRYIGVN
CEECCCCCCCCCCHHHHCHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCEEEEEEEECC
QDAMDKAMTRFKI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]