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The map label for this gene is yoeC [H]

Identifier: 49183466

GI number: 49183466

Start: 462346

End: 462639

Strand: Direct

Name: yoeC [H]

Synonym: BAS0438

Alternate gene names: 49183466

Gene position: 462346-462639 (Clockwise)

Preceding gene: 49183465

Following gene: 49183467

Centisome position: 8.84

GC content: 34.35

Gene sequence:

>294_bases
ATGAATTTCGTTCAACCGATACGTGATCCAGAACAAATACAGCAGCTTAAAGAGTATTTTAAGGAAAAGAGCTTACGTAA
TTACATTCTCTTCATTATGGGGATTAATACGGGTCTTAGAATCTCAGATATTTTGAAACTGAAGGTAGGAGATGTTAAGG
GTAGTCATATATCTATGAGGGAAAAGAAAACAGGGAAGCAGAAACGAATACAAATTACCGCATCTCTCAAAAGGGAGCTT
AAATGGTTTATTGAAGAAAGAGAAGATAATGAGTACCTATTACAAAGTAGATAA

Upstream 100 bases:

>100_bases
AGCGTACTTATCGACGTTGGAAGTCTAAAGCATTTTACAAACTTGCTTTTGCGCTTGGATTAGAAGTTTACGAGACAGAA
GAAACGGGAGGTAATGAATA

Downstream 100 bases:

>100_bases
GGTAGGAATCGTCCAATTGGTCGCAGCATGGCATATAAGATATTAAGTGGAGCAGCGGCAGAGTTTGGTTTAGATGAAAT
AGGGACACATACGCTGAGAA

Product: phage integrase, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MNFVQPIRDPEQIQQLKEYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMREKKTGKQKRIQITASLKREL
KWFIEEREDNEYLLQSR

Sequences:

>Translated_97_residues
MNFVQPIRDPEQIQQLKEYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMREKKTGKQKRIQITASLKREL
KWFIEEREDNEYLLQSR
>Mature_97_residues
MNFVQPIRDPEQIQQLKEYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMREKKTGKQKRIQITASLKREL
KWFIEEREDNEYLLQSR

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 11627; Mature: 11627

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVQPIRDPEQIQQLKEYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMR
CCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCHHHHEEEEECCCCCCEEECH
EKKTGKQKRIQITASLKRELKWFIEEREDNEYLLQSR
HHHCCCHHEEEHHHHHHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MNFVQPIRDPEQIQQLKEYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMR
CCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCHHHHEEEEECCCCCCEEECH
EKKTGKQKRIQITASLKRELKWFIEEREDNEYLLQSR
HHHCCCHHEEEHHHHHHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]