Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ycbM [H]
Identifier: 49183301
GI number: 49183301
Start: 287877
End: 288899
Strand: Reverse
Name: ycbM [H]
Synonym: BAS0272
Alternate gene names: 49183301
Gene position: 288899-287877 (Counterclockwise)
Preceding gene: 49183302
Following gene: 49183300
Centisome position: 5.53
GC content: 33.33
Gene sequence:
>1023_bases GTGAAAAGCTTGAAGATTGATAAAATCCTCTTCCTTATTTCATTACAACTTATCATTTACGGGCTTTTACATATACAAAT GGATCCAAAAGTAAAAATTTCTTTATTTATTACCCTTATCTTAATTACAATGTATCTCTTCTTTTCAAGAATACAATTTA TTCAAAATCACAAATCAATAGACACTAAATTAAGTCGTGCACTAAAGGGGAATTTACAAACGAGATTATTCACAAGTAAT GATCAATCGTTACATAATATCGTTTTTTCAATAAACGAACTAATAACTGAATTAGAAAAGGTTCGGATTAAAGCAAAAAG GTCTGAGGAATCTAGAAAACAACTTTTATCTAGTATCTCACACGATATCCGAACACCACTCACCTCCATTATTGGATATA TCGACGCTTTAAAAGATGGGGTTGCTGCTTCTGAAATAGAAAAGCAAGAATATCTTAAAATACTTTATATGAAATCAAAT AACTTAAAGCACCTAGTTGATGAAATATTCAATATGGCAAAGCTAGACGCTAATGAATTTCCACTAAAAGAAGAAAAACT CGACTTTTCTGAAGTTACTAGAGAAGTTTTGATCGATTTTTTACCTGAAATCTCAAAACATAATATTAAACTGCAAGTTC TTATGCCAGAGTCTACTTGTCCTATCATTGCAGATCACCTAAGCCTTATGCGGATTATAGGTAATTTAATGAAAAATGCC ATTTATTACGGAAAGGATGGGAAAACAATAGGAGTCGAACTACTAGAAACGGATGCAGCATATGAACTTCTTATTTGGGA CAAAGGCCCTGGTATTCCAAAACATGATTTACAAAACGTATTTGAGCGAATGTACCGAAGCGAACAATCAAGAAACTCGT CTTTTGGTGGTAGTGGGCTCGGCCTTTCTATTTCTAAAGCGCTCGTTGAGAAGAATGGTGGGCATATATGGGTTGAAAGT ATTCCATGGGAACGAACCACTTTTGGCTTTTCCATTCCAAAACACAATACTTTTAAGAAATAG
Upstream 100 bases:
>100_bases GTTATGGTACATATTCGAAAACTTAGAAAGAAAATAGAAATCGATCCTTCCAATCCAAAATTCATTCAAACTGTATGGGG AATTGGCTATAAGTTTGTAG
Downstream 100 bases:
>100_bases TTAAGAAATGATTAATATGCAGTTAAGCCTTCCTTTTTATCATGTAAGTAAGAACTTATAGAAAGTGGGTGTCTCCTATA AACACAATTATAAAAACGAC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKSLKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLFFSRIQFIQNHKSIDTKLSRALKGNLQTRLFTSN DQSLHNIVFSINELITELEKVRIKAKRSEESRKQLLSSISHDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSN NLKHLVDEIFNMAKLDANEFPLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNA IYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRNSSFGGSGLGLSISKALVEKNGGHIWVES IPWERTTFGFSIPKHNTFKK
Sequences:
>Translated_340_residues MKSLKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLFFSRIQFIQNHKSIDTKLSRALKGNLQTRLFTSN DQSLHNIVFSINELITELEKVRIKAKRSEESRKQLLSSISHDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSN NLKHLVDEIFNMAKLDANEFPLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNA IYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRNSSFGGSGLGLSISKALVEKNGGHIWVES IPWERTTFGFSIPKHNTFKK >Mature_340_residues MKSLKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLFFSRIQFIQNHKSIDTKLSRALKGNLQTRLFTSN DQSLHNIVFSINELITELEKVRIKAKRSEESRKQLLSSISHDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSN NLKHLVDEIFNMAKLDANEFPLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNA IYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRNSSFGGSGLGLSISKALVEKNGGHIWVES IPWERTTFGFSIPKHNTFKK
Specific function: Member of the two-component regulatory system ycbM/ycbL. Probably activates ycbL by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=264, Percent_Identity=28.030303030303, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1786912, Length=274, Percent_Identity=27.3722627737226, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789149, Length=266, Percent_Identity=30.8270676691729, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=28.5140562248996, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI48994928, Length=244, Percent_Identity=28.6885245901639, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI145693157, Length=238, Percent_Identity=24.7899159663866, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1786600, Length=228, Percent_Identity=27.6315789473684, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786783, Length=239, Percent_Identity=26.7782426778243, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787894, Length=290, Percent_Identity=25.5172413793103, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790346, Length=267, Percent_Identity=25.4681647940075, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI87082128, Length=312, Percent_Identity=24.0384615384615, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87081816, Length=247, Percent_Identity=24.2914979757085, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788279, Length=235, Percent_Identity=28.0851063829787, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788549, Length=304, Percent_Identity=21.7105263157895, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=24.8888888888889, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 38981; Mature: 38981
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLFFSRIQFIQNHKSI CCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTKLSRALKGNLQTRLFTSNDQSLHNIVFSINELITELEKVRIKAKRSEESRKQLLSSIS HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSNNLKHLVDEIFNMAKLDANEF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCC PLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNA CCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC IYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRNSSFGGSGL EEECCCCCEEEHEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC GLSISKALVEKNGGHIWVESIPWERTTFGFSIPKHNTFKK CHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MKSLKIDKILFLISLQLIIYGLLHIQMDPKVKISLFITLILITMYLFFSRIQFIQNHKSI CCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTKLSRALKGNLQTRLFTSNDQSLHNIVFSINELITELEKVRIKAKRSEESRKQLLSSIS HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HDIRTPLTSIIGYIDALKDGVAASEIEKQEYLKILYMKSNNLKHLVDEIFNMAKLDANEF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCC PLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNA CCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC IYYGKDGKTIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRNSSFGGSGL EEECCCCCEEEHEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC GLSISKALVEKNGGHIWVESIPWERTTFGFSIPKHNTFKK CHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704254; 9384377 [H]