Definition Bacillus anthracis str. Sterne chromosome, complete genome.
Accession NC_005945
Length 5,228,663

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The map label for this gene is truA

Identifier: 49183176

GI number: 49183176

Start: 138254

End: 138997

Strand: Direct

Name: truA

Synonym: BAS0142

Alternate gene names: 49183176

Gene position: 138254-138997 (Clockwise)

Preceding gene: 49183175

Following gene: 49183177

Centisome position: 2.64

GC content: 36.83

Gene sequence:

>744_bases
ATGGATAGAATAAAATGTACGGTTGCATATGATGGCATGCATTTTTGTGGTTATCAAATTCAACCGCAGCATCGTACTGT
TCAACAAGAGATAGAGAAGGCTTTACAGAAATTGCATAAAGGAGAACTTGTTCGTGTTCAGGCATCAGGCAGAACGGATT
CTACCGTTCACGCTAAAGGACAAGTGATACACTTTGATACACCGTTGTCTCTTGAAGAGTGGCAATGGAGTAATGCATTA
AACACAATGCTACCAGATGATATTGTTATCACACAGGTAGAGAAAAAAACAGAAGAATTTCATGCTCGATACGGTGTTGA
GAGAAAAGAATATCGTTATCGTGTACTAGTATCAAAGACTGCGGATGTATTCCGTAGAAATTATGTATATCAATATCCAT
ATCCACTCGAAGTAAACTCTATAAGAAAAGCGATCCCTTATTTTATTGGAACGCATGATTTCACTTCTTTTTGTTCGGCA
AAAACTGACAAAAAAGATAAAGTGAGAACAATTTATGAAATCGAGCTAATTGAGCAAGACGATGAATTAATTTTTCGTTT
TGTAGGGAATGGATTTTTATATAATATGGTCAGGATTATTGTTGGTACGTTACTTAACGTAGGCCAAGGAAAGCTTGATC
CGGATAGCATTCCAGAGATTTTAGCGAAACAAAATCGTCAGTTTGCTGGAAAGATGGCTCCTGGTCATGGGCTTTATTTA
TGGCAGGTAAACTATAACAACTAA

Upstream 100 bases:

>100_bases
GGCAACTACGCTGGAAAACAAGCGATACAGTAACGATTATAAGCTTACTTTGTTTAGCTTGTATTTTGGCATGGGTGCGA
TCGTAATGGAGAATAGAGAA

Downstream 100 bases:

>100_bases
TCCTGGTGTAACATTTGCTTGACATTAGAAACTCAAAAGTATATCATAACATATGGTATTGTTTCTAAAACCACGATTAG
CCCCGGAAGGAAATCGTGTT

Product: tRNA pseudouridine synthase A

Products: NA

Alternate protein names: tRNA pseudouridylate synthase I 1; tRNA-uridine isomerase I 1

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLHKGELVRVQASGRTDSTVHAKGQVIHFDTPLSLEEWQWSNAL
NTMLPDDIVITQVEKKTEEFHARYGVERKEYRYRVLVSKTADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFTSFCSA
KTDKKDKVRTIYEIELIEQDDELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLDPDSIPEILAKQNRQFAGKMAPGHGLYL
WQVNYNN

Sequences:

>Translated_247_residues
MDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLHKGELVRVQASGRTDSTVHAKGQVIHFDTPLSLEEWQWSNAL
NTMLPDDIVITQVEKKTEEFHARYGVERKEYRYRVLVSKTADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFTSFCSA
KTDKKDKVRTIYEIELIEQDDELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLDPDSIPEILAKQNRQFAGKMAPGHGLYL
WQVNYNN
>Mature_247_residues
MDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLHKGELVRVQASGRTDSTVHAKGQVIHFDTPLSLEEWQWSNAL
NTMLPDDIVITQVEKKTEEFHARYGVERKEYRYRVLVSKTADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFTSFCSA
KTDKKDKVRTIYEIELIEQDDELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLDPDSIPEILAKQNRQFAGKMAPGHGLYL
WQVNYNN

Specific function: Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs

COG id: COG0101

COG function: function code J; Pseudouridylate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA pseudouridine synthase truA family

Homologues:

Organism=Homo sapiens, GI23503259, Length=249, Percent_Identity=30.5220883534137, Blast_Score=102, Evalue=5e-22,
Organism=Escherichia coli, GI1788657, Length=243, Percent_Identity=32.0987654320988, Blast_Score=145, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6321112, Length=239, Percent_Identity=26.3598326359833, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007752, Length=301, Percent_Identity=25.2491694352159, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRUA1_BACAN (Q6I4Q2)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   YP_026428.1
- ProteinModelPortal:   Q6I4Q2
- SMR:   Q6I4Q2
- EnsemblBacteria:   EBBACT00000013723
- EnsemblBacteria:   EBBACT00000023705
- EnsemblBacteria:   EBBACT00000082830
- GeneID:   2847886
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_0142
- TIGR:   BA_0142
- TIGR:   GBAA_0142
- GeneTree:   EBGT00050000002107
- HOGENOM:   HBG621020
- OMA:   QSKTPFR
- ProtClustDB:   PRK00021
- BioCyc:   BANT260799:BAS0142-MONOMER
- BRENDA:   5.4.99.12
- HAMAP:   MF_00171
- InterPro:   IPR020103
- InterPro:   IPR001406
- InterPro:   IPR020097
- InterPro:   IPR020095
- InterPro:   IPR020094
- Gene3D:   G3DSA:3.30.70.580
- Gene3D:   G3DSA:3.30.70.660
- PANTHER:   PTHR11142
- PIRSF:   PIRSF001430
- TIGRFAMs:   TIGR00071

Pfam domain/function: PF01416 PseudoU_synth_1; SSF55120 PsdUridine_synth_cat_dom

EC number: =5.4.99.12

Molecular weight: Translated: 28772; Mature: 28772

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: ACT_SITE 53-53

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLHKGELVRVQASGRTDSTVHAKG
CCCEEEEEEECCEEECCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCC
QVIHFDTPLSLEEWQWSNALNTMLPDDIVITQVEKKTEEFHARYGVERKEYRYRVLVSKT
EEEEECCCCCHHHHCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHEEEEEEEHHH
ADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFTSFCSAKTDKKDKVRTIYEIELIEQD
HHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHEEEEEEEEECCC
DELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLDPDSIPEILAKQNRQFAGKMAPGHGLYL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCEEEE
WQVNYNN
EEEECCC
>Mature Secondary Structure
MDRIKCTVAYDGMHFCGYQIQPQHRTVQQEIEKALQKLHKGELVRVQASGRTDSTVHAKG
CCCEEEEEEECCEEECCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCC
QVIHFDTPLSLEEWQWSNALNTMLPDDIVITQVEKKTEEFHARYGVERKEYRYRVLVSKT
EEEEECCCCCHHHHCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHEEEEEEEHHH
ADVFRRNYVYQYPYPLEVNSIRKAIPYFIGTHDFTSFCSAKTDKKDKVRTIYEIELIEQD
HHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHEEEEEEEEECCC
DELIFRFVGNGFLYNMVRIIVGTLLNVGQGKLDPDSIPEILAKQNRQFAGKMAPGHGLYL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCEEEE
WQVNYNN
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629