Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ybaF [H]
Identifier: 49183175
GI number: 49183175
Start: 137445
End: 138239
Strand: Direct
Name: ybaF [H]
Synonym: BAS0141
Alternate gene names: 49183175
Gene position: 137445-138239 (Clockwise)
Preceding gene: 49183174
Following gene: 49183176
Centisome position: 2.63
GC content: 35.85
Gene sequence:
>795_bases ATGCAGCAGTTGATTATTGGAAGGTATATTCCAGGGAATTCTCTTATTCATCAACTTGATCCACGTACGAAGCTGCTGAT TGTCTTTTTATATGTATTTGTTGTTTTCTTAGCAAATAATGCGATTTCATATGGATTTTTATTTTTATATGCACTCATTG CTTTATTTTTTGCAAAAGTGCCGATTCGTTATGTACTTTCGGGCTTAAAACCAATTCTATGGATTTTTCTTTTTACATTT TTCCTGCATATTTTCACAAATAAAGAAGGGGAAGTATTATTCCAGCTTGGTTGGTTTTCGATACATGAAAAAGGATTAGA GCAAGGGATATACATTTCTATACGATTCTTCGTTATTATTTTAATGACGACATTATTAACGTTAACGACGACACCCATTG AGATTACAGATGGTTTGGAGACGTTATTAAAGCCGTTGAAGCGTATAAAAGTTCCTGTTCATGAAATCGCATTAATGATG TCAATTTCTCTTCGTTTTATTCCGACATTAATGGATGAGACGAGTAAAATAATGAAGGCACAATCGTCACGTGGTATTGA TTTCGCAGGGGGACCGATAAAAGATAGAATGAAAGCTATCATTTCACTACTCGTTCCTCTATTTATCAGTGCTTTTAAGC GTGCAGAGGACTTAGCAATCGCTATGGAAGCTCGTGGATATCAAAGTGGCGAAGGGCGTACTAAATTTAGGCAACTACGC TGGAAAACAAGCGATACAGTAACGATTATAAGCTTACTTTGTTTAGCTTGTATTTTGGCATGGGTGCGATCGTAA
Upstream 100 bases:
>100_bases TTGAAGAGAAGTTTGGCATTTCAATCCCAAAGGCTACCTTATCTTTAGAGGATCTTACTCATGAAGTTGTGCAGGTGTTA CGAAAAGGTGGTCATGAATC
Downstream 100 bases:
>100_bases TGGAGAATAGAGAAATGGATAGAATAAAATGTACGGTTGCATATGATGGCATGCATTTTTGTGGTTATCAAATTCAACCG CAGCATCGTACTGTTCAACA
Product: cobalt transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISYGFLFLYALIALFFAKVPIRYVLSGLKPILWIFLFTF FLHIFTNKEGEVLFQLGWFSIHEKGLEQGIYISIRFFVIILMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMM SISLRFIPTLMDETSKIMKAQSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDLAIAMEARGYQSGEGRTKFRQLR WKTSDTVTIISLLCLACILAWVRS
Sequences:
>Translated_264_residues MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISYGFLFLYALIALFFAKVPIRYVLSGLKPILWIFLFTF FLHIFTNKEGEVLFQLGWFSIHEKGLEQGIYISIRFFVIILMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMM SISLRFIPTLMDETSKIMKAQSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDLAIAMEARGYQSGEGRTKFRQLR WKTSDTVTIISLLCLACILAWVRS >Mature_264_residues MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISYGFLFLYALIALFFAKVPIRYVLSGLKPILWIFLFTF FLHIFTNKEGEVLFQLGWFSIHEKGLEQGIYISIRFFVIILMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMM SISLRFIPTLMDETSKIMKAQSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDLAIAMEARGYQSGEGRTKFRQLR WKTSDTVTIISLLCLACILAWVRS
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003339 [H]
Pfam domain/function: PF02361 CbiQ [H]
EC number: NA
Molecular weight: Translated: 30130; Mature: 30130
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISYGFLFLYALIALFFAKV CCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PIRYVLSGLKPILWIFLFTFFLHIFTNKEGEVLFQLGWFSIHEKGLEQGIYISIRFFVII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHH LMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMMSISLRFIPTLMDETSKIMKA HHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDLAIAMEARGYQSGEGRTKFRQLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH WKTSDTVTIISLLCLACILAWVRS CCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQLIIGRYIPGNSLIHQLDPRTKLLIVFLYVFVVFLANNAISYGFLFLYALIALFFAKV CCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PIRYVLSGLKPILWIFLFTFFLHIFTNKEGEVLFQLGWFSIHEKGLEQGIYISIRFFVII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHH LMTTLLTLTTTPIEITDGLETLLKPLKRIKVPVHEIALMMSISLRFIPTLMDETSKIMKA HHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSSRGIDFAGGPIKDRMKAIISLLVPLFISAFKRAEDLAIAMEARGYQSGEGRTKFRQLR HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH WKTSDTVTIISLLCLACILAWVRS CCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]