Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is secY [H]
Identifier: 49183164
GI number: 49183164
Start: 130140
End: 131441
Strand: Direct
Name: secY [H]
Synonym: BAS0130
Alternate gene names: 49183164
Gene position: 130140-131441 (Clockwise)
Preceding gene: 49183163
Following gene: 49183165
Centisome position: 2.49
GC content: 39.4
Gene sequence:
>1302_bases ATGTTTCGTACAATCTCCAACTTTATGCGCGTTGCTGAGATAAGACGTAAAATATTATTCACTTTAGCGATGTTAATCGT ATTCAGGATTGGCACGTTTATCCCCGTGCCATTTACAAATGGAGACGTACTGAAGGCACAAGATCAATTAAATGCTTTAG GTATTCTAAATACATTTGGCGGTGGAGCCTTGAAAAATTTCTCCATCTTTGCGATGGGAATCATGCCGTATATTACAGCA TCCATCATCGTGCAATTATTGCAGATGGATGTTGTTCCTAAATTTTCGGAATGGGCGAAGCAAGGTGAAATGGGCCGTCG TAAATTAACGCAATTCACGCGTTATTTTACAATTGTTCTTGCGTTTATTCAGGGGTTTGGTATGTCAATCGGTTTTAACG GTATGGTAGGTGGACAATTAATTTTGAATCCTGGTTGGAGCACTTATTTATACATTGCTACGGTACTGACTGCTGGTACT GCATTTTTAATGTGGTTAGGTGAACAGATTACAGCTAAAGGTGTAGGTAATGGTATTTCCATTCTTATCTTTGGTGGTAT TGCCGCAGCGATCCCAAGTGTTATATCTCAAGTGTATCAGCAACAGTTTCAAAATATCGGAGATCAATTGTTCATGAGTA TCGTTAAAGTTGCATTGATCTTACTAGCTGTGCTAGCAGTTATTGTGGGTGTTATTTTCATTCAACAGGCTGTTAGAAAG ATCCCAATTCAATATGCGAAGCGTGTAACAGGAGGAAATGGTGGTTATGCTGGAGCACAAAACACACATTTACCGCTTAA GGTAAATAGTGCTGGTGTTATTCCAGTAATTTTTGCTGTTTCATTCTTAATTACGCCTCCGACTATTGCACAGTTCTTCC CGAAACATGATGTATCGCAGTGGATTATTGCAAACTTTAACTATTCTCACCCAGTGGGAATGATCATATATGTTGCGCTC ATTGTAGCCTTCACATATTTCTATGCATTTGTTCAGGTTAATCCAGAGCAAATGTCAGAGAATCTAAACAAACAAGGTGG ATATGTTCCAGGTATTCGTCCGGGTAAGAATACGGAACAATATCTAACAAAAATCTTGTATCGTTTGACCTTTGTAGGAT CAATTTTCCTAGCAGCGATTGCAATCTTACCAGTTATCTTTACGAAGCTGGGAAATCTTCCTCCATCTGCACAGATCGGT GGAACGAGTATGTTAATCGTTGTCGGCGTTGCTTTAGAAACAATGAAGCAGCTAGAAAGCCAACTGGTAAAACGCCATTA CAAAGGGTTTATCAAGCAGTGA
Upstream 100 bases:
>100_bases GCGGCGCAGTAGAGAAAAAACTAACTGTTAAAGCGCACAAGTTCTCTTCAAGTGCTAAAGAAGCAATTGAAGCAGCTGGC GGATCAGTTGAGGTGATCTA
Downstream 100 bases:
>100_bases GTAAGTGGGAAGTATTGTCTTCCCTACATGCTCATGTACTCTGAGGGGGAACAAGGATGAACTTAATTTTAATGGGGCTT CCTGGTGCTGGTAAAGGTAC
Product: preprotein translocase subunit SecY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVLKAQDQLNALGILNTFGGGALKNFSIFAMGIMPYITA SIIVQLLQMDVVPKFSEWAKQGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGT AFLMWLGEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRK IPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVAL IVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIG GTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ
Sequences:
>Translated_433_residues MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVLKAQDQLNALGILNTFGGGALKNFSIFAMGIMPYITA SIIVQLLQMDVVPKFSEWAKQGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGT AFLMWLGEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRK IPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVAL IVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIG GTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ >Mature_433_residues MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVLKAQDQLNALGILNTFGGGALKNFSIFAMGIMPYITA SIIVQLLQMDVVPKFSEWAKQGEMGRRKLTQFTRYFTIVLAFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGT AFLMWLGEQITAKGVGNGISILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRK IPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQWIIANFNYSHPVGMIIYVAL IVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQYLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIG GTSMLIVVGVALETMKQLESQLVKRHYKGFIKQ
Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]
COG id: COG0201
COG function: function code U; Preprotein translocase subunit SecY
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secY/SEC61-alpha family [H]
Homologues:
Organism=Escherichia coli, GI1789696, Length=430, Percent_Identity=43.0232558139535, Blast_Score=289, Evalue=2e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002208 - InterPro: IPR023201 [H]
Pfam domain/function: PF00344 SecY [H]
EC number: NA
Molecular weight: Translated: 47515; Mature: 47515
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVLKAQDQLNALGILNTFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCC GGALKNFSIFAMGIMPYITASIIVQLLQMDVVPKFSEWAKQGEMGRRKLTQFTRYFTIVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGIS HHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRK EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQ CCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCH WIIANFNYSHPVGMIIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQ HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHH YLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QLVKRHYKGFIKQ HHHHHHHHHHCCC >Mature Secondary Structure MFRTISNFMRVAEIRRKILFTLAMLIVFRIGTFIPVPFTNGDVLKAQDQLNALGILNTFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCC GGALKNFSIFAMGIMPYITASIIVQLLQMDVVPKFSEWAKQGEMGRRKLTQFTRYFTIVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFIQGFGMSIGFNGMVGGQLILNPGWSTYLYIATVLTAGTAFLMWLGEQITAKGVGNGIS HHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ILIFGGIAAAIPSVISQVYQQQFQNIGDQLFMSIVKVALILLAVLAVIVGVIFIQQAVRK EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPIQYAKRVTGGNGGYAGAQNTHLPLKVNSAGVIPVIFAVSFLITPPTIAQFFPKHDVSQ CCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCH WIIANFNYSHPVGMIIYVALIVAFTYFYAFVQVNPEQMSENLNKQGGYVPGIRPGKNTEQ HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHH YLTKILYRLTFVGSIFLAAIAILPVIFTKLGNLPPSAQIGGTSMLIVVGVALETMKQLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QLVKRHYKGFIKQ HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1435726 [H]