Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is spoVT [H]
Identifier: 49183088
GI number: 49183088
Start: 58191
End: 58727
Strand: Direct
Name: spoVT [H]
Synonym: BAS0053
Alternate gene names: 49183088
Gene position: 58191-58727 (Clockwise)
Preceding gene: 49183087
Following gene: 49183089
Centisome position: 1.11
GC content: 36.31
Gene sequence:
>537_bases ATGAAAGCAACTGGAATCGTACGTCGAATTGATGATTTAGGTAGGGTAGTAATCCCAAAGGAAATTCGTAGAACTTTACG TATTCGAGAAGGGGACCCATTAGAAATATTTGTTGATCGCGATGGAGAAGTAATTTTAAAGAAATATTCTCCAATTAGCG AACTAGGTGATTTTGCAAAAGAATATGCAGAGGCTTTATATGATAGCTTAGGACATAATGTGCTTGTATGCGATCGAGAT TCTATTATCGCAGTATCAGGCGTATCAAAAAAAGAATACTTAAATAAAAGCGTTGGCGATTTAATTGAAAAAACGATGGA AGAAAGAAAGTCTGTTATTATGACGGACGAAAGTGATGTTTCCATTATTGATGGTGTAACAGAAAAGGTTCATTCTTATA CAGTTGGACCGATTGTTGCAAATGGAGACCCAATTGGGGCTGTCATTATTTTTTCAAAAGAAGCGATTATAAGCGAAATA GAGCACAAAGCGGTCAATACTGCTGCCAGTTTCTTAGCGAAACAAATGGAACAGTAA
Upstream 100 bases:
>100_bases GAACTAATGTGTAAAATACTATGTCTAACAGTTGGTGATTTTTACATGAACAGGTAAATTCACCACTTTCATCATCAGTA GAAAGTGAGGCAGCATTAGA
Downstream 100 bases:
>100_bases AGGTGTGTAATTTTAGAAGTAGCAATCTTTCCTAATTATGATATTTCTTCTTGAGAAATCAATTATTTGGAGATATATGT ATATTGAATGAAGGTAGCGC
Product: stage V sporulation protein T
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYAEALYDSLGHNVLVCDRD SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI EHKAVNTAASFLAKQMEQ
Sequences:
>Translated_178_residues MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYAEALYDSLGHNVLVCDRD SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI EHKAVNTAASFLAKQMEQ >Mature_178_residues MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYAEALYDSLGHNVLVCDRD SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI EHKAVNTAASFLAKQMEQ
Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]
COG id: COG2002
COG function: function code K; Regulators of stationary/sporulation gene expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis AbrB and Abh [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014213 - InterPro: IPR006339 - InterPro: IPR007159 [H]
Pfam domain/function: PF04014 SpoVT_AbrB [H]
EC number: NA
Molecular weight: Translated: 19693; Mature: 19693
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH EYAEALYDSLGHNVLVCDRDSIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDV HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCC SIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEIEHKAVNTAASFLAKQMEQ HHHHHHHHHHHCEECCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH EYAEALYDSLGHNVLVCDRDSIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDV HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCC SIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEIEHKAVNTAASFLAKQMEQ HHHHHHHHHHHCEECCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 8755877 [H]