Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yabM [H]
Identifier: 49183089
GI number: 49183089
Start: 58958
End: 60559
Strand: Direct
Name: yabM [H]
Synonym: BAS0054
Alternate gene names: 49183089
Gene position: 58958-60559 (Clockwise)
Preceding gene: 49183088
Following gene: 49183090
Centisome position: 1.13
GC content: 34.83
Gene sequence:
>1602_bases ATGGAATCGAAGAAGTATCAAGCCTTTTGGCGTGGGGCTATTATATTAACAATCGCAAGTTTTGTTACAAAGGTATTAAG CGCTTTTTACCGTATTCCATATCAAAATATAGCGGGTGATATTGGTTTTTATATTTACCAACAAATATATCCGTTTTATG GATTTTGTTTAATTTTAGCTACTTATGGGTTCCCCATTATAATTTCAAAAATGGTTGCGGAACGATTAGAACGAGGGAAA AAACAAGAAGCAGAAGAAATTATTTGTGTATCTTTTTGGTTTTTATTAGGAATTGGTTTCATAGGATTTTTTACATTGTT CTTTGGTGCCGAAGTAATTGCGACAGCCATGGGCGATATACACTTAGATAAGCTATTACGTGTTATTTCCTTTTCATTCA TATTGATGCCGTTTTTATCTGTAGCAAGAGGATATTTCCAGGGGTTCAATAATATGGTGCCAACAGCTGTGTCGCAAGTG ATAGAGCAAACGATTCGTGTTTCTATTATTGTATTTTTATCCCTATTCCTAATTGCTCATGAATTTGATTTATATACAGT TGGTGCTGGTGCTATGCTAGGTTCAATCGCAGGTGGACTGATTGGGATTATCGTACTTATACTTTATATGCGTCATGACT TTCGTTCTATATTCTTCAAAAGTGTAAAGAGGATTAAAGGGAAAAAGAAGATTATTAAAATCCTGTTTTGGCAGGGGTTA GCGATTTGTGTTAGTAACTTAGTGCTTATTTTTATACAAATGGCTGATTCTGTTTCTTTCTATTCTTTACTTATTGGAGC AGGAGAGCCGGCTGAAAGTGCAAAAGTGTTAAAAGGTGTTTATGACAGAAGTATCCCGCTTATGCAATTAGGTACTGTCG TGACAACTTCTTTCTCGTTGTCGCTTATTCCAATTATTACGGCAGCGAAGGAAAGAGGAGATCTTACCTTTATTCGAGAA AAGGTAAGGTTAGCAATGAAAATAACGTTTGTTATCGGATTTGCAGCGGCTATTGGATTAACTTGTATTATCCAGCCTAC GAATATTATGTTGTTTGAAAACAGTGATGGGTCAGATGTTTTATCCATTTTATCTTTATCTATTTTATTTAGTTCATTGT CAATTACAACCGCTTCTATTTTGCAAGGGTTAGGACAAACATTAAAACCAGCAATATTTGTTGTATTTGGAGGTTGTTTG AAGCTAGTTTTAAACTATATATTAATGCCGTATTTCGGTGCGAAGGGAGCCGCAATTGCAACTTTAGTTGCATTAATTGT AATTTCCGTATTAAATAGTATGTTACTTATGCGGGCTGTATCGGAATCGCTTATCGATAAACGGAATATGTTAGGTATAG TTATTAGTGGTTTCAGTATGGGATTTGTATTAATAATGTTTATGCGTGTATTGCAAATGTCTGGATTAGTAATGGATACA AGTCATAGAGGTGTTGCAACATTTGAGGCGTTGTTAGGTGTAGCCATCGGCGGATTGGCATATATGTTTTTAATTTTAAA ATTACGTGTATTTACGAAAGCGGAAATAGGAACGGTTATGAAAAAAGAGAAAAAAGAAGGTTCATTGAAGAAGAGTGGAT AG
Upstream 100 bases:
>100_bases GCGTTGCACGAACGTATTCTTACTTGTGTAGGTGAGTAAGCTTGTCCTTTTCTTTATGATATAATACGAGGGGTGAGAAT AGAAAAAGGAGTTTTCTTGT
Downstream 100 bases:
>100_bases AGGTGGCAGGTTGTGAGTGGAATCATTACTATTTTAGGATTAGGTGCTGGTGAATTAGATCAGTTAACGATGGGTGTATA TCGAAAAATAAAAGAAGCAG
Product: stage V sporulation protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG
Sequences:
>Translated_533_residues MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG >Mature_533_residues MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILATYGFPIIISKMVAERLERGK KQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDIHLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQV IEQTIRVSIIVFLSLFLIAHEFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSLSLIPIITAAKERGDLTFIRE KVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDVLSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCL KLVLNYILMPYFGAKGAAIATLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 58672; Mature: 58672
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYGFPIIISKMVAERLERGKKQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDI HHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQVIEQTIRVSIIVFLSLFLIAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL HCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLIPIITAAKERGDLTFIREKVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCHHH LSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCLKLVLNYILMPYFGAKGAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MESKKYQAFWRGAIILTIASFVTKVLSAFYRIPYQNIAGDIGFYIYQQIYPFYGFCLILA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYGFPIIISKMVAERLERGKKQEAEEIICVSFWFLLGIGFIGFFTLFFGAEVIATAMGDI HHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDKLLRVISFSFILMPFLSVARGYFQGFNNMVPTAVSQVIEQTIRVSIIVFLSLFLIAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDLYTVGAGAMLGSIAGGLIGIIVLILYMRHDFRSIFFKSVKRIKGKKKIIKILFWQGL HCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AICVSNLVLIFIQMADSVSFYSLLIGAGEPAESAKVLKGVYDRSIPLMQLGTVVTTSFSL HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLIPIITAAKERGDLTFIREKVRLAMKITFVIGFAAAIGLTCIIQPTNIMLFENSDGSDV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCHHH LSILSLSILFSSLSITTASILQGLGQTLKPAIFVVFGGCLKLVLNYILMPYFGAKGAAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TLVALIVISVLNSMLLMRAVSESLIDKRNMLGIVISGFSMGFVLIMFMRVLQMSGLVMDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC SHRGVATFEALLGVAIGGLAYMFLILKLRVFTKAEIGTVMKKEKKEGSLKKSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]