Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is gyrA [H]
Identifier: 49183045
GI number: 49183045
Start: 6596
End: 9067
Strand: Direct
Name: gyrA [H]
Synonym: BAS0006
Alternate gene names: 49183045
Gene position: 6596-9067 (Clockwise)
Preceding gene: 49183044
Following gene: 49183047
Centisome position: 0.13
GC content: 36.53
Gene sequence:
>2472_bases ATGTCAGACAATCAACAACAAGCACGAATTCGAGAAATTAATATTAGCCATGAAATGCGTACCTCATTTTTAGATTACGC AATGAGTGTTATCGTATCTCGTGCATTACCAGATGTTCGTGATGGATTAAAACCTGTGCATCGTAGGGTTTTATATGCGA TGAATGATTTAGGAATTACGGCTGATAAAGCGTATAAAAAATCAGCACGTATTGTTGGTGAAGTAATCGGTAAGTATCAC CCTCATGGTGATTCAGCTGTTTATGAAACGATGGTACGTATGGCGCAAGATTTCAGTCAACGTTATATGCTTGTTGATGG GCATGGTAACTTTGGATCTGTCGATGGAGATTCAGCGGCAGCAATGCGTTATACAGAAGCAAGAATGTCTAAAATCTCTA TGGAATTAATACGTGATATTTCAAAAAATACAATTGATTATCAAGATAACTATGATGGTTCTGAAAGAGAGCCGATTGTG TTACCAGCGCGTTTTCCTAACTTACTAGTAAATGGTACGACAGGTATTGCAGTTGGTATGGCAACAAATATTCCGCCGCA TCAACTTGGTGAAGTAATTGATGGCGTATTGGCATTAAGTCATAATCCCGATATTACTATTGCAGAATTAATGGAGTGCA TTCCAGGACCAGATTTTCCGACGGCAGGTTTAATTTTAGGAAGAAGTGGTATTCGTAGAGCTTATGAAACAGGACGCGGG TCTATTATACTTCGTGCTAAAGTTGAAATTGAAGAGAAGTCAAATGGCAAACAATCTATTATCGTAACGGAATTACCTTA TCAAGTGAATAAGGCGCGATTGATTGAAAAAATTGCAGAATTAGTTCGCGATAAGAAAATTGAAGGTATTACAGATTTAC GTGATGAATCAGATCGAAATGGTATGCGTATTGTTATGGAAGTACGTCGTGATGCCAATGCTAATGTATTATTAAATAAC TTATATAAACATACAGCACTTCAAACAAGTTTTGGTATTAACATGCTGTCTCTTGTAAATGGAGAACCACAAGTACTGAA TTTAAAACAAAATTTATATCATTACTTGGAACATCAAAAGGTAGTAATTCGTAGACGTACTGCTTATGAACTTGAAAAGG CAGAAGCACGTGCTCATATCTTAGAAGGATTACGAATTGCTTTAGACCATCTGGATGAAGTTATTACATTAATTCGTAGT TCGAAAACAGCGGAAATTGCAAAGCAAGGTTTAATGGAACGTTTTGGCTTAAGTGAAAAACAAGCGCAAGCTATTTTAGA TATGCGTCTGCAACGCTTAACAGGATTAGAACGCGAAAAAATTGAACAAGAATATCAAGATTTAATGAAGTTAATCGCTG AATTAAAAGCAATCTTAGCAGATGAAGAAAAGGTTCTTGAGATTATTCGTGAAGAATTAACAGAAGTAAAAGAGCGCTTC AATGATAAGAGACGTACAGAAATTACAATTGGTGGTATGGAGTCTATTGAAGATGAAGACTTGATTCCAGAACAAAACAT CGCCATTACGTTAACTCATAATGGTTATATTAAGAGGTTGCCAGCTTCTACGTACAAAACACAGAACCGTGGTGGACGTG GTGTGCAGGGAATGGGAACAAATGATGATGATTTCGTAGAGCATTTATTAACCACTTCTACGCATGACCATATTCTATTC TTCACTAATAAAGGGAAAGTATACCGTACGAAAGGATATGAAATCCCAGAGTATAGTCGTACAGCGAAAGGTATACCTAT TATTAACTTATTAGGTGTAGATAAGGGTGAATGGATTAACGCCATTATTCCAATTCGTGAATTTGGTGACGATGAATTCT TATTCTTCACAACAAAACAAGGTATCTCTAAGAGAACACCACTTTCATCATTTGCGAATATACGTACAAATGGTTTAATT GCAATCTCTCTTCGTGAAGAGGATGAAGTAATATCTGTACGTTTAACATCTGGTGATAAGGATATTATTGTAGGTACAAG CAATGGTATGCTAATTCGTTTTAACGAGCAAGATGTACGTTCTATGGGACGTAATGCGGCTGGTGTAAAAGCAATTACAT TAGGTGAAGAAGATCAAGTTGTAGGTATGGAAATTGTCGAAGAGGATGTAAATGTTTTAATTGTAACGAAAAATGGTTAT GGAAAACGTACTCCGATTGATGAATATCGCTTGCAAAGCCGTGGTGGTAAAGGTCTGAAGACTTGTAATATTACAGATAA AAACGGTAAATTAGTAGCTGTTAAATCTGTAACAGGTGAAGAAGATATCATGTTAATTACAGCAGCAGGTGTTATTATTC GTATGCCAGTTGATCAAATCTCTCAAATGGGACGTAATACACAAGGTGTTCGTCTAATTCGATTAGAGGATGAGCAAGAG GTAGCGACAGTAGCAAAAGCACAAAAAGATGATGAGGAAGAAACGAGCGAAGAGGTTTCTTCAGAAGAATAA
Upstream 100 bases:
>100_bases CTTGATATTTAAATGAGTAATGACAGGAATCTGAGTATTCCTGTCTTCTACATATAAATCAATGTATGTGTAACGGAAAT GTAAGAGGAGGTGCTCGTTG
Downstream 100 bases:
>100_bases GAGAGGAGATATCTCCTCTCTTTATTTTTTTATAATAATACTTGCATGGGGAAGAGAAAGTCTATATAATAGGCAGAGTC AGCAAATGAGAGATACAAGT
Product: DNA gyrase subunit A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 823; Mature: 822
Protein sequence:
>823_residues MSDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGITADKAYKKSARIVGEVIGKYH PHGDSAVYETMVRMAQDFSQRYMLVDGHGNFGSVDGDSAAAMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIV LPARFPNLLVNGTTGIAVGMATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPDFPTAGLILGRSGIRRAYETGRG SIILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIEKIAELVRDKKIEGITDLRDESDRNGMRIVMEVRRDANANVLLNN LYKHTALQTSFGINMLSLVNGEPQVLNLKQNLYHYLEHQKVVIRRRTAYELEKAEARAHILEGLRIALDHLDEVITLIRS SKTAEIAKQGLMERFGLSEKQAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERF NDKRRTEITIGGMESIEDEDLIPEQNIAITLTHNGYIKRLPASTYKTQNRGGRGVQGMGTNDDDFVEHLLTTSTHDHILF FTNKGKVYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWINAIIPIREFGDDEFLFFTTKQGISKRTPLSSFANIRTNGLI AISLREEDEVISVRLTSGDKDIIVGTSNGMLIRFNEQDVRSMGRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGY GKRTPIDEYRLQSRGGKGLKTCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQISQMGRNTQGVRLIRLEDEQE VATVAKAQKDDEEETSEEVSSEE
Sequences:
>Translated_823_residues MSDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGITADKAYKKSARIVGEVIGKYH PHGDSAVYETMVRMAQDFSQRYMLVDGHGNFGSVDGDSAAAMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIV LPARFPNLLVNGTTGIAVGMATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPDFPTAGLILGRSGIRRAYETGRG SIILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIEKIAELVRDKKIEGITDLRDESDRNGMRIVMEVRRDANANVLLNN LYKHTALQTSFGINMLSLVNGEPQVLNLKQNLYHYLEHQKVVIRRRTAYELEKAEARAHILEGLRIALDHLDEVITLIRS SKTAEIAKQGLMERFGLSEKQAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERF NDKRRTEITIGGMESIEDEDLIPEQNIAITLTHNGYIKRLPASTYKTQNRGGRGVQGMGTNDDDFVEHLLTTSTHDHILF FTNKGKVYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWINAIIPIREFGDDEFLFFTTKQGISKRTPLSSFANIRTNGLI AISLREEDEVISVRLTSGDKDIIVGTSNGMLIRFNEQDVRSMGRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGY GKRTPIDEYRLQSRGGKGLKTCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQISQMGRNTQGVRLIRLEDEQE VATVAKAQKDDEEETSEEVSSEE >Mature_822_residues SDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGITADKAYKKSARIVGEVIGKYHP HGDSAVYETMVRMAQDFSQRYMLVDGHGNFGSVDGDSAAAMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIVL PARFPNLLVNGTTGIAVGMATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPDFPTAGLILGRSGIRRAYETGRGS IILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIEKIAELVRDKKIEGITDLRDESDRNGMRIVMEVRRDANANVLLNNL YKHTALQTSFGINMLSLVNGEPQVLNLKQNLYHYLEHQKVVIRRRTAYELEKAEARAHILEGLRIALDHLDEVITLIRSS KTAEIAKQGLMERFGLSEKQAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERFN DKRRTEITIGGMESIEDEDLIPEQNIAITLTHNGYIKRLPASTYKTQNRGGRGVQGMGTNDDDFVEHLLTTSTHDHILFF TNKGKVYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWINAIIPIREFGDDEFLFFTTKQGISKRTPLSSFANIRTNGLIA ISLREEDEVISVRLTSGDKDIIVGTSNGMLIRFNEQDVRSMGRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGYG KRTPIDEYRLQSRGGKGLKTCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQISQMGRNTQGVRLIRLEDEQEV ATVAKAQKDDEEETSEEVSSEE
Specific function: DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings [H]
COG id: COG0188
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the topoisomerase gyrA/parC subunit family [H]
Homologues:
Organism=Homo sapiens, GI19913408, Length=318, Percent_Identity=25.7861635220126, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI19913406, Length=317, Percent_Identity=25.2365930599369, Blast_Score=74, Evalue=5e-13, Organism=Escherichia coli, GI1788562, Length=850, Percent_Identity=52.9411764705882, Blast_Score=877, Evalue=0.0, Organism=Escherichia coli, GI1789396, Length=695, Percent_Identity=37.1223021582734, Blast_Score=434, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17535065, Length=212, Percent_Identity=30.6603773584906, Blast_Score=77, Evalue=5e-14, Organism=Caenorhabditis elegans, GI212645657, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324241, Length=200, Percent_Identity=28, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI17136538, Length=166, Percent_Identity=31.3253012048193, Blast_Score=73, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020899 - InterPro: IPR005743 - InterPro: IPR006691 - InterPro: IPR002205 - InterPro: IPR013758 - InterPro: IPR013757 - InterPro: IPR013760 [H]
Pfam domain/function: PF03989 DNA_gyraseA_C; PF00521 DNA_topoisoIV [H]
EC number: =5.99.1.3 [H]
Molecular weight: Translated: 92339; Mature: 92208
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGIT CCCCHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC ADKAYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSQRYMLVDGHGNFGSVDGDSAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHH AMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIVLPARFPNLLVNGTTGIAVGM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEE ATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPDFPTAGLILGRSGIRRAYETGRG ECCCCHHHHHHHHHHHHEECCCCCEEHHHHHHHCCCCCCCCCCEEECCHHHHHHHHCCCC SIILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIEKIAELVRDKKIEGITDLRDESDRN CEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC GMRIVMEVRRDANANVLLNNLYKHTALQTSFGINMLSLVNGEPQVLNLKQNLYHYLEHQK CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHH VVIRRRTAYELEKAEARAHILEGLRIALDHLDEVITLIRSSKTAEIAKQGLMERFGLSEK HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH QAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NDKRRTEITIGGMESIEDEDLIPEQNIAITLTHNGYIKRLPASTYKTQNRGGRGVQGMGT CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHCCCCCCCCCCCCCCC NDDDFVEHLLTTSTHDHILFFTNKGKVYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWIN CHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHCCCCCEEEEEECCCCCCEE AIIPIREFGDDEFLFFTTKQGISKRTPLSSFANIRTNGLIAISLREEDEVISVRLTSGDK EEEEHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCC DIIVGTSNGMLIRFNEQDVRSMGRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGY EEEEECCCCEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCC GKRTPIDEYRLQSRGGKGLKTCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQI CCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCHHHH SQMGRNTQGVRLIRLEDEQEVATVAKAQKDDEEETSEEVSSEE HHCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure SDNQQQARIREINISHEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMNDLGIT CCCHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC ADKAYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSQRYMLVDGHGNFGSVDGDSAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHH AMRYTEARMSKISMELIRDISKNTIDYQDNYDGSEREPIVLPARFPNLLVNGTTGIAVGM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCEEEEE ATNIPPHQLGEVIDGVLALSHNPDITIAELMECIPGPDFPTAGLILGRSGIRRAYETGRG ECCCCHHHHHHHHHHHHEECCCCCEEHHHHHHHCCCCCCCCCCEEECCHHHHHHHHCCCC SIILRAKVEIEEKSNGKQSIIVTELPYQVNKARLIEKIAELVRDKKIEGITDLRDESDRN CEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC GMRIVMEVRRDANANVLLNNLYKHTALQTSFGINMLSLVNGEPQVLNLKQNLYHYLEHQK CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHH VVIRRRTAYELEKAEARAHILEGLRIALDHLDEVITLIRSSKTAEIAKQGLMERFGLSEK HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH QAQAILDMRLQRLTGLEREKIEQEYQDLMKLIAELKAILADEEKVLEIIREELTEVKERF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH NDKRRTEITIGGMESIEDEDLIPEQNIAITLTHNGYIKRLPASTYKTQNRGGRGVQGMGT CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEECCCHHHCCCCCCCCCCCCCCC NDDDFVEHLLTTSTHDHILFFTNKGKVYRTKGYEIPEYSRTAKGIPIINLLGVDKGEWIN CHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHCCCCCEEEEEECCCCCCEE AIIPIREFGDDEFLFFTTKQGISKRTPLSSFANIRTNGLIAISLREEDEVISVRLTSGDK EEEEHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCC DIIVGTSNGMLIRFNEQDVRSMGRNAAGVKAITLGEEDQVVGMEIVEEDVNVLIVTKNGY EEEEECCCCEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCC GKRTPIDEYRLQSRGGKGLKTCNITDKNGKLVAVKSVTGEEDIMLITAAGVIIRMPVDQI CCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCHHHH SQMGRNTQGVRLIRLEDEQEVATVAKAQKDDEEETSEEVSSEE HHCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2987847; 7584024; 9384377 [H]