Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447488
Identifier: 46447488
GI number: 46447488
Start: 2214626
End: 2214976
Strand: Reverse
Name: 46447488
Synonym: pc1854
Alternate gene names: NA
Gene position: 2214976-2214626 (Counterclockwise)
Preceding gene: 46447489
Following gene: 46447479
Centisome position: 91.74
GC content: 29.34
Gene sequence:
>351_bases GTGCCTGAACAATCCGTTCAAATCAAAGGCTTTATTTATCAATCTCCTTGGAATACCTTTATACTAGCTTCTCAACCTAA TTTAAAAAGTTGTTGTATTGGCAATTCTCATCAAGTAGCACAACAAATTTTTTTGAAAGGAATTGATAAAATTTCTACTA ATCAAATGGTGACAGTTCAAGGGATATTAAAGTTACAAGCGCAAGAGGAAGGGAAAAAATTAAGGCAATTTTATATTTTA GAAAATGCAGAAATCATTTCTCAGAAAGTCTTTCCTTTTTGGACGGTAATTTTTTGTTTCATCTTTATCATTTTTTCTTT TTTCGTTTCTAAGAAGAAACAAAAAACATAA
Upstream 100 bases:
>100_bases GTGGGTTCTAAAACTTATTATTTTTAGCTTCTTTTTTTTATCCTTTACAACTTCCTCACAAATAACTTTTGAAGAATTAC AAAGCGAAAATTATTTTTTC
Downstream 100 bases:
>100_bases CTTTTTCAGTCTGAATGCCTTTGCTTTCCCAGAAAAAATCTTGTTAAACTCAAAATTTAGGTTTAAAAAAGCCATTAGGT GAGAGTTAATTTAATTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPEQSVQIKGFIYQSPWNTFILASQPNLKSCCIGNSHQVAQQIFLKGIDKISTNQMVTVQGILKLQAQEEGKKLRQFYIL ENAEIISQKVFPFWTVIFCFIFIIFSFFVSKKKQKT
Sequences:
>Translated_116_residues MPEQSVQIKGFIYQSPWNTFILASQPNLKSCCIGNSHQVAQQIFLKGIDKISTNQMVTVQGILKLQAQEEGKKLRQFYIL ENAEIISQKVFPFWTVIFCFIFIIFSFFVSKKKQKT >Mature_115_residues PEQSVQIKGFIYQSPWNTFILASQPNLKSCCIGNSHQVAQQIFLKGIDKISTNQMVTVQGILKLQAQEEGKKLRQFYILE NAEIISQKVFPFWTVIFCFIFIIFSFFVSKKKQKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13442; Mature: 13311
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQSVQIKGFIYQSPWNTFILASQPNLKSCCIGNSHQVAQQIFLKGIDKISTNQMVTVQ CCCCCEEEEEEEEECCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCEEEHH GILKLQAQEEGKKLRQFYILENAEIISQKVFPFWTVIFCFIFIIFSFFVSKKKQKT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PEQSVQIKGFIYQSPWNTFILASQPNLKSCCIGNSHQVAQQIFLKGIDKISTNQMVTVQ CCCCEEEEEEEEECCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCEEEHH GILKLQAQEEGKKLRQFYILENAEIISQKVFPFWTVIFCFIFIIFSFFVSKKKQKT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA