Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is ntpI [H]
Identifier: 46447311
GI number: 46447311
Start: 2013253
End: 2015169
Strand: Reverse
Name: ntpI [H]
Synonym: pc1677
Alternate gene names: 46447311
Gene position: 2015169-2013253 (Counterclockwise)
Preceding gene: 46447312
Following gene: 46447310
Centisome position: 83.46
GC content: 33.91
Gene sequence:
>1917_bases ATGCGTAAAGATGTTAAAAAATTCTTATTTCTTGGATTAGCAGATGAAAAAAAATCTTTTTTTCAACAAGCTCAAAAACT TGGGTTTATTCACTTTATTGATCCTTGCCAAACTTCAAACCGTGATATACCTGAAGCTATAGAAAAATTGACTACTGCAA TAAAAATTTTGCGTGGCTTACCTTTCGTTGAACAAGAGGAAAATTATCAACCCTTAAACTCAAACACGATAGTAGAAAAT ATTCTTTCGCTATGTAAAAAAAGTGAGAAAAAACAAGAAGAAATCCGTGTATTAAGATTAGAAATGTCACGGATTGAAAT TTTTGGGAATTTTTCTTTAGAAGATATTTATTTCATTGAAAATGCAGGTAAACGAAAAATTCAATTTTTTGTTGCACGCT CTAGTGCGTTTAAAGAACAAGATCCGCCTGATGAGTTGATTTATATCTCTTCAAACCAAGGTTTGGATTATTACTTTGCT ATTAACGAACAATCAGTTTCTTATGATAAACTCATTGAAATTAAGATCAATCGATCTTTGCAAAACTTAAATCAACAATT AATTGAAGCAAATTCAGAAAGAAGACGAATTGATCATCAACTTAAAGAGTTAGCAAAATACAATGAATTTTTGCATCATG CCCTAGTAAATAAACTCAATAGTCATCATCTTAATCACGCACAGACCTATGTTCAACAAACGATGGATGGTTTACTATTC GCTGTTGAAGGATGGGTGCCGGCGAACAAAGTTGATCAAATAGAAAAAGTCACGAAAGCTTTAAATGTCTATATTGATGA AGTGGCAATTGAAGCCTCAGATGTTATTCCTACTTATTTAGAAAATAGTGGTTTTAGTAGATTGGGAGAAGATTTAGTTA ATATTTATGATACACCGTCATCTTCAGATCATGATCCTTCAAATTGGGTTCTTTGGTGTTTTACGCTCTTTTTTGCTTTT ATTATCGGTGATGCCGGTTACGGATTTATTTATTTAGCTTTAGCACTTTTTCTTCGTTACAAATATCCTGATTTGAAAGG TTTAAGTAAACGTTTACTGAATCTTTTTACTATTTTATGTGTAGGATGTATTGTGTGGGGGACTTTGATGACCTCGTTTT TTGGGATGCAAATCGATATCAATAATCCCATACGTAAAATTTCTCTCGTACAATGGTTATCAAAGGAAAAAATTGCTTAT CACATTGCTCATCAGGATAGTACTTACCAAAAATGGCTTCAAGCATATCCTACATTAGCAAATCATGCTGATGCTCATGA GTTTGTTTCGTTTATTCCAGATTGGGAGCCAAGCAAAGGCCCAGTTATTTTAAGTATGATCAGTGATACAATTATGTTTG AATTGGCTTTATTTATTGGTGTCGTTCATCTTTTGCTATCGTTGTTGCGCTATGGATTGCGCAACATTCCAAATTTAGGG TGGGCCGCATTTCTGATTGGAGCTTACCTTTATTTCCCTTCTCACCTTCAAGCTCCAAGTTTTCTTAATTTTATTGGAAA TGTGGATTTGAATGAAGGGGGAAAAATAGGTTTACAATTTATGATAGGGGGTATTGCTTTTGCATGGATAACCTCTATTT GGAAAAATGGGTGGACGGGAATTTTTGAAATCACAGTTTTAATTCAAGTTTTTGCCGATGTCTTATCTTATTTACGTCTT TATGCTTTGGCTCTGGCCGGAGCTGTTGTGGGCGCGACAGTCAATGAAATTGCCAGTGGATTACCCTTATTAGCTTCTTT CTTTTTGGTTATGATTGCCCATTTTGTGAATTTGATTTTGGGAACAATGGGAGGAGTAATTCATGGATTGCGACTTAACT TTTTAGAGTGGTATCACTACTCTTTTGAGGGGGGAGGAAAAAAATTTCAACCACTTAAATTATTAAAAATCGAGTAA
Upstream 100 bases:
>100_bases CAGCAATTAGCTGCTGTTTCTCGAGCAAAAGTTGCTAAAACAAAAATTGAAGCGAATAAGAAAGCTTTTCTTTTGACTCT TTCCAAAAAGGAGTTCAAAC
Downstream 100 bases:
>100_bases ATCAATAGGAGTTTTCAATGGATATTAATATGGTTGGCCCTGCAATGGCACTAGGATTGAGTAGTATGGGATGCAGTATT GGATGTTGGATTGCAGGGTC
Product: V-type ATP synthase subunit I
Products: ADP; phosphate; H+
Alternate protein names: V-ATPase subunit I [H]
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MRKDVKKFLFLGLADEKKSFFQQAQKLGFIHFIDPCQTSNRDIPEAIEKLTTAIKILRGLPFVEQEENYQPLNSNTIVEN ILSLCKKSEKKQEEIRVLRLEMSRIEIFGNFSLEDIYFIENAGKRKIQFFVARSSAFKEQDPPDELIYISSNQGLDYYFA INEQSVSYDKLIEIKINRSLQNLNQQLIEANSERRRIDHQLKELAKYNEFLHHALVNKLNSHHLNHAQTYVQQTMDGLLF AVEGWVPANKVDQIEKVTKALNVYIDEVAIEASDVIPTYLENSGFSRLGEDLVNIYDTPSSSDHDPSNWVLWCFTLFFAF IIGDAGYGFIYLALALFLRYKYPDLKGLSKRLLNLFTILCVGCIVWGTLMTSFFGMQIDINNPIRKISLVQWLSKEKIAY HIAHQDSTYQKWLQAYPTLANHADAHEFVSFIPDWEPSKGPVILSMISDTIMFELALFIGVVHLLLSLLRYGLRNIPNLG WAAFLIGAYLYFPSHLQAPSFLNFIGNVDLNEGGKIGLQFMIGGIAFAWITSIWKNGWTGIFEITVLIQVFADVLSYLRL YALALAGAVVGATVNEIASGLPLLASFFLVMIAHFVNLILGTMGGVIHGLRLNFLEWYHYSFEGGGKKFQPLKLLKIE
Sequences:
>Translated_638_residues MRKDVKKFLFLGLADEKKSFFQQAQKLGFIHFIDPCQTSNRDIPEAIEKLTTAIKILRGLPFVEQEENYQPLNSNTIVEN ILSLCKKSEKKQEEIRVLRLEMSRIEIFGNFSLEDIYFIENAGKRKIQFFVARSSAFKEQDPPDELIYISSNQGLDYYFA INEQSVSYDKLIEIKINRSLQNLNQQLIEANSERRRIDHQLKELAKYNEFLHHALVNKLNSHHLNHAQTYVQQTMDGLLF AVEGWVPANKVDQIEKVTKALNVYIDEVAIEASDVIPTYLENSGFSRLGEDLVNIYDTPSSSDHDPSNWVLWCFTLFFAF IIGDAGYGFIYLALALFLRYKYPDLKGLSKRLLNLFTILCVGCIVWGTLMTSFFGMQIDINNPIRKISLVQWLSKEKIAY HIAHQDSTYQKWLQAYPTLANHADAHEFVSFIPDWEPSKGPVILSMISDTIMFELALFIGVVHLLLSLLRYGLRNIPNLG WAAFLIGAYLYFPSHLQAPSFLNFIGNVDLNEGGKIGLQFMIGGIAFAWITSIWKNGWTGIFEITVLIQVFADVLSYLRL YALALAGAVVGATVNEIASGLPLLASFFLVMIAHFVNLILGTMGGVIHGLRLNFLEWYHYSFEGGGKKFQPLKLLKIE >Mature_638_residues MRKDVKKFLFLGLADEKKSFFQQAQKLGFIHFIDPCQTSNRDIPEAIEKLTTAIKILRGLPFVEQEENYQPLNSNTIVEN ILSLCKKSEKKQEEIRVLRLEMSRIEIFGNFSLEDIYFIENAGKRKIQFFVARSSAFKEQDPPDELIYISSNQGLDYYFA INEQSVSYDKLIEIKINRSLQNLNQQLIEANSERRRIDHQLKELAKYNEFLHHALVNKLNSHHLNHAQTYVQQTMDGLLF AVEGWVPANKVDQIEKVTKALNVYIDEVAIEASDVIPTYLENSGFSRLGEDLVNIYDTPSSSDHDPSNWVLWCFTLFFAF IIGDAGYGFIYLALALFLRYKYPDLKGLSKRLLNLFTILCVGCIVWGTLMTSFFGMQIDINNPIRKISLVQWLSKEKIAY HIAHQDSTYQKWLQAYPTLANHADAHEFVSFIPDWEPSKGPVILSMISDTIMFELALFIGVVHLLLSLLRYGLRNIPNLG WAAFLIGAYLYFPSHLQAPSFLNFIGNVDLNEGGKIGLQFMIGGIAFAWITSIWKNGWTGIFEITVLIQVFADVLSYLRL YALALAGAVVGATVNEIASGLPLLASFFLVMIAHFVNLILGTMGGVIHGLRLNFLEWYHYSFEGGGKKFQPLKLLKIE
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]
COG id: COG1269
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit I
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase 116 kDa subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002490 [H]
Pfam domain/function: PF01496 V_ATPase_I [H]
EC number: 3.6.3.14
Molecular weight: Translated: 72739; Mature: 72739
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDVKKFLFLGLADEKKSFFQQAQKLGFIHFIDPCQTSNRDIPEAIEKLTTAIKILRGL CCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC PFVEQEENYQPLNSNTIVENILSLCKKSEKKQEEIRVLRLEMSRIEIFGNFSLEDIYFIE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE NAGKRKIQFFVARSSAFKEQDPPDELIYISSNQGLDYYFAINEQSVSYDKLIEIKINRSL CCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHEEEEEECHHH QNLNQQLIEANSERRRIDHQLKELAKYNEFLHHALVNKLNSHHLNHAQTYVQQTMDGLLF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVEGWVPANKVDQIEKVTKALNVYIDEVAIEASDVIPTYLENSGFSRLGEDLVNIYDTPS HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCC SSDHDPSNWVLWCFTLFFAFIIGDAGYGFIYLALALFLRYKYPDLKGLSKRLLNLFTILC CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGCIVWGTLMTSFFGMQIDINNPIRKISLVQWLSKEKIAYHIAHQDSTYQKWLQAYPTLA HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCHH NHADAHEFVSFIPDWEPSKGPVILSMISDTIMFELALFIGVVHLLLSLLRYGLRNIPNLG CCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH WAAFLIGAYLYFPSHLQAPSFLNFIGNVDLNEGGKIGLQFMIGGIAFAWITSIWKNGWTG HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH IFEITVLIQVFADVLSYLRLYALALAGAVVGATVNEIASGLPLLASFFLVMIAHFVNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GTMGGVIHGLRLNFLEWYHYSFEGGGKKFQPLKLLKIE HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECC >Mature Secondary Structure MRKDVKKFLFLGLADEKKSFFQQAQKLGFIHFIDPCQTSNRDIPEAIEKLTTAIKILRGL CCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC PFVEQEENYQPLNSNTIVENILSLCKKSEKKQEEIRVLRLEMSRIEIFGNFSLEDIYFIE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE NAGKRKIQFFVARSSAFKEQDPPDELIYISSNQGLDYYFAINEQSVSYDKLIEIKINRSL CCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCHHHEEEEEECHHH QNLNQQLIEANSERRRIDHQLKELAKYNEFLHHALVNKLNSHHLNHAQTYVQQTMDGLLF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVEGWVPANKVDQIEKVTKALNVYIDEVAIEASDVIPTYLENSGFSRLGEDLVNIYDTPS HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCC SSDHDPSNWVLWCFTLFFAFIIGDAGYGFIYLALALFLRYKYPDLKGLSKRLLNLFTILC CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VGCIVWGTLMTSFFGMQIDINNPIRKISLVQWLSKEKIAYHIAHQDSTYQKWLQAYPTLA HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCHH NHADAHEFVSFIPDWEPSKGPVILSMISDTIMFELALFIGVVHLLLSLLRYGLRNIPNLG CCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH WAAFLIGAYLYFPSHLQAPSFLNFIGNVDLNEGGKIGLQFMIGGIAFAWITSIWKNGWTG HHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH IFEITVLIQVFADVLSYLRLYALALAGAVVGATVNEIASGLPLLASFFLVMIAHFVNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GTMGGVIHGLRLNFLEWYHYSFEGGGKKFQPLKLLKIE HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]