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The map label for this gene is ntpD [H]

Identifier: 46447312

GI number: 46447312

Start: 2015162

End: 2015809

Strand: Reverse

Name: ntpD [H]

Synonym: pc1678

Alternate gene names: 46447312

Gene position: 2015809-2015162 (Counterclockwise)

Preceding gene: 46447313

Following gene: 46447311

Centisome position: 83.49

GC content: 35.34

Gene sequence:

>648_bases
GTGGCTGATGTCAAATTAACAAAAAATGAGTTGCGTGACCAACAAATGCAACTTGTACAATTAGAAAAGTATTTGCCAAC
TTTACAGCTTAAAAAAGCTATGCTTCAGTCAGTTATTCAGGAAACACGCATTGAAATTCATCGCCTCGAAGACTTAATGG
GGAAAAAACAAGACGCAGTTAACATGTTCAGTTCGCTTTTAGCGATCAAAACGACAATTGATCCGATGCAAGCTATACAA
TTGAAAACAGTTTTTAAAAGGTATGAAAATATTGCAGGGGTAGAAATTCCTTATTTTGAGGGAATCGAATTTGAAGCTTT
CACATATAGCTTATTTGAAACATCTCCGTGGATTGATGCAGCCGTTTTAGGTCTACGTTCTTTAGTTGAATTACGAGAGC
AAATTAAGATTACGACAGAGCAAAAACAAGCTTTAGAGCGCGAACTCCGTGAAGTCTCAATTAGAGTGAATTTATTTGAG
AAAATTTTGATTCCTCGAGCTATTGAGAATATTCGTATAATTAAAGTATTCTTAGGGGATCAGCAATTAGCTGCTGTTTC
TCGAGCAAAAGTTGCTAAAACAAAAATTGAAGCGAATAAGAAAGCTTTTCTTTTGACTCTTTCCAAAAAGGAGTTCAAAC
ATGCGTAA

Upstream 100 bases:

>100_bases
CAGAATGCTTTCTAGCAAGCGAAGTTGGAATTAAGGAAAGTGTTATTTCTAAATATTGGCCAGAAATTGCTCAAATAAGT
AAGTGATTGAGGGGTGATTT

Downstream 100 bases:

>100_bases
AGATGTTAAAAAATTCTTATTTCTTGGATTAGCAGATGAAAAAAAATCTTTTTTTCAACAAGCTCAAAAACTTGGGTTTA
TTCACTTTATTGATCCTTGC

Product: V-type ATP synthase subunit D

Products: NA

Alternate protein names: V-ATPase subunit D [H]

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MADVKLTKNELRDQQMQLVQLEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAVNMFSSLLAIKTTIDPMQAIQ
LKTVFKRYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDAAVLGLRSLVELREQIKITTEQKQALERELREVSIRVNLFE
KILIPRAIENIRIIKVFLGDQQLAAVSRAKVAKTKIEANKKAFLLTLSKKEFKHA

Sequences:

>Translated_215_residues
MADVKLTKNELRDQQMQLVQLEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAVNMFSSLLAIKTTIDPMQAIQ
LKTVFKRYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDAAVLGLRSLVELREQIKITTEQKQALERELREVSIRVNLFE
KILIPRAIENIRIIKVFLGDQQLAAVSRAKVAKTKIEANKKAFLLTLSKKEFKHA
>Mature_214_residues
ADVKLTKNELRDQQMQLVQLEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAVNMFSSLLAIKTTIDPMQAIQL
KTVFKRYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDAAVLGLRSLVELREQIKITTEQKQALERELREVSIRVNLFEK
ILIPRAIENIRIIKVFLGDQQLAAVSRAKVAKTKIEANKKAFLLTLSKKEFKHA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002699 [H]

Pfam domain/function: PF01813 ATP-synt_D [H]

EC number: NA

Molecular weight: Translated: 24863; Mature: 24731

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVKLTKNELRDQQMQLVQLEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAV
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NMFSSLLAIKTTIDPMQAIQLKTVFKRYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHCCCCHHHH
AVLGLRSLVELREQIKITTEQKQALERELREVSIRVNLFEKILIPRAIENIRIIKVFLGD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC
QQLAAVSRAKVAKTKIEANKKAFLLTLSKKEFKHA
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCC
>Mature Secondary Structure 
ADVKLTKNELRDQQMQLVQLEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAV
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NMFSSLLAIKTTIDPMQAIQLKTVFKRYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEHHCCCCHHHH
AVLGLRSLVELREQIKITTEQKQALERELREVSIRVNLFEKILIPRAIENIRIIKVFLGD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC
QQLAAVSRAKVAKTKIEANKKAFLLTLSKKEFKHA
HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]