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The map label for this gene is atpC

Identifier: 46447301

GI number: 46447301

Start: 2005543

End: 2005986

Strand: Reverse

Name: atpC

Synonym: pc1667

Alternate gene names: 46447301

Gene position: 2005986-2005543 (Counterclockwise)

Preceding gene: 46447302

Following gene: 46447300

Centisome position: 83.08

GC content: 35.14

Gene sequence:

>444_bases
ATGCTTTATCCATTATCCATTTTAACTTCTGAAAAAAATGTCTTTAATGAAGACGTTTATTCTGTGAATGTACCAGGCGC
TGATGGATACTTCGAAGTGCTAGCACATCATGCTACTGTAATCGCCTTGTTGCAGCCAGGGAAATTGACAATTATCAATA
AAGATCATCAAAAGCTTTATTTCGGCATAACAACTGGATTTATTGAGGTTTCTCATAACAGTGCAACAATTATTGCTGAT
GCAATTGAATCCGTTCAAGAAATTGATGTCGAAAGGGCAAAGCAGTCTTATGAACGTGCTAAAATGCGTTTGGAGAGTCC
TGATAAACACGTGGATAAAGAACGTGCAAAACGTTCCTTGAATAGAGCAAAAAATCGTATTAAACTGTTTTTAGAAATTC
ATCCACAAGTTAGTTTCATACCTCTCAAAGCATTATTAATTTAA

Upstream 100 bases:

>100_bases
AAATGGATAATATTCCTGAGCAAGCTTTTTATATGGTGGGAACAATTGAAGAAGTTTTCGAAAAAGCTGAGCAAATGAAA
TAAGGTTAGGGTGATTACAG

Downstream 100 bases:

>100_bases
TTTTCTTTGTAAACAAGTACTAGTAAGGAATTTAAATCCAATTTTGTAATTCAAACTTTTTGCAATTATATTTAATAAAT
CTTTAGTAAAAACATTTTCA

Product: putative H+-transporting two-sector ATPase (epsilon chain, atpC)

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLYPLSILTSEKNVFNEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKDHQKLYFGITTGFIEVSHNSATIIAD
AIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSLNRAKNRIKLFLEIHPQVSFIPLKALLI

Sequences:

>Translated_147_residues
MLYPLSILTSEKNVFNEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKDHQKLYFGITTGFIEVSHNSATIIAD
AIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSLNRAKNRIKLFLEIHPQVSFIPLKALLI
>Mature_147_residues
MLYPLSILTSEKNVFNEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKDHQKLYFGITTGFIEVSHNSATIIAD
AIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSLNRAKNRIKLFLEIHPQVSFIPLKALLI

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=130, Percent_Identity=23.8461538461538, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_PARUW (Q6MAK8)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008666.1
- ProteinModelPortal:   Q6MAK8
- SMR:   Q6MAK8
- STRING:   Q6MAK8
- GeneID:   2779779
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1667
- NMPDR:   fig|264201.1.peg.1667
- eggNOG:   COG0355
- OMA:   NNEMVIS
- PhylomeDB:   Q6MAK8
- ProtClustDB:   CLSK2762444
- BioCyc:   CPRO264201:PC1667-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 16669; Mature: 16669

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPLSILTSEKNVFNEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKDHQKLY
CCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEECCCEEEEEECCCCEEE
FGITTGFIEVSHNSATIIADAIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSL
EEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NRAKNRIKLFLEIHPQVSFIPLKALLI
HHHHHHEEEEEEECCCEEEEEHEEECC
>Mature Secondary Structure
MLYPLSILTSEKNVFNEDVYSVNVPGADGYFEVLAHHATVIALLQPGKLTIINKDHQKLY
CCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEECCCEEEEEECCCCEEE
FGITTGFIEVSHNSATIIADAIESVQEIDVERAKQSYERAKMRLESPDKHVDKERAKRSL
EEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
NRAKNRIKLFLEIHPQVSFIPLKALLI
HHHHHHEEEEEEECCCEEEEEHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA