Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is menC [H]
Identifier: 46447297
GI number: 46447297
Start: 2000914
End: 2001852
Strand: Reverse
Name: menC [H]
Synonym: pc1663
Alternate gene names: 46447297
Gene position: 2001852-2000914 (Counterclockwise)
Preceding gene: 46447298
Following gene: 46447295
Centisome position: 82.91
GC content: 33.65
Gene sequence:
>939_bases ATGAAATTCGAAAAATTTATTTGCAATCTTCGGCAATTTACACTCACTAATGGATTAAAAAGATCTATTGCGATTATTTC TTTAGTTGATAAAAAAGGAAATATCTCAAAAGGAGAAGTCGCCCCATTACCCCCTTGGAGCAAAGAAACCTTAGAAGAGG CTATTCGCCAAATTGATGCCAAAAAAAGCTTTATTTTAAATATAGATTGGACAATTGAAAATTATAGAGATGCATTAATG CATCTTCATCTTTTTCCCTCGGTACAATTTGGAATAGAATCGGCTCTTCTATCCTTTTTAGATCCTTTAAAAACATATTC TATACCAGTAAGCGCCTTATTGATGGGATCCAAAAAAGAAATTCTTGCTCAAGCAAAACTTCGCCTACAAGAAGGTTATC AAATAGCTAAACTTAAAGTCAGCCAACTTTCGTTCTCCGATGCTGCAAAGCTTATTCACCAATTAAAAGATACTTTTCGT TTAAGAATAGATGTTAATCGAGCCTGGAAAACGGAAGATTCTTTACAATTCTTTTCAGAATATTCTTTAGATAGTTTTGA TTATGTTGAAGAGCCTTTTCAAAACCCTAAAGAATTATCTCTTTTTTCTCATCCCCTTGCTGTTGATGAGTCTTTTCCTT CAAATTTTTCTCTTCAAGATTTAGAAACTTTATGCTCTCTTAAATCTCTTATTTATAAACCCACTCTACAAGGGGGAATG ACAACTTGTTTGCCTGTATATAAATGGGCCAAACAACGCAATATTGAATTCGTTCTAAGTAGTAGTTTTGAAAGTGAATT GGGACTCTCCCACCTCATTTCAATGGCTGCAAGATTAAAGCTGACTTCACCTATAGGAATTGGCACCTATCATTTTTTGC CTCAAACGGAAGGTCCTTTTCTTATTTCAAATGGACAGGTTAACTTAAAAAATTTGTAA
Upstream 100 bases:
>100_bases AAATTAAAAAAGAAAACATTGATAAATAGTTTCTTGCGTAATTATTCTATCTGCCTGTTAAAATTGGTTTTTAAAAAAAG CTCGTGATGTAAAAGGTCTA
Downstream 100 bases:
>100_bases CTAATCAGTAAGCTTTATTTGAAAAAAATAAAAGATAAACGCAATTTAAAATTTTTGTGGGTAAATTCTAGTCAAAAATT TAAGTTGAATTATTTTTGAT
Product: putative o-succinylbenzoate synthase II, menC
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKFEKFICNLRQFTLTNGLKRSIAIISLVDKKGNISKGEVAPLPPWSKETLEEAIRQIDAKKSFILNIDWTIENYRDALM HLHLFPSVQFGIESALLSFLDPLKTYSIPVSALLMGSKKEILAQAKLRLQEGYQIAKLKVSQLSFSDAAKLIHQLKDTFR LRIDVNRAWKTEDSLQFFSEYSLDSFDYVEEPFQNPKELSLFSHPLAVDESFPSNFSLQDLETLCSLKSLIYKPTLQGGM TTCLPVYKWAKQRNIEFVLSSSFESELGLSHLISMAARLKLTSPIGIGTYHFLPQTEGPFLISNGQVNLKNL
Sequences:
>Translated_312_residues MKFEKFICNLRQFTLTNGLKRSIAIISLVDKKGNISKGEVAPLPPWSKETLEEAIRQIDAKKSFILNIDWTIENYRDALM HLHLFPSVQFGIESALLSFLDPLKTYSIPVSALLMGSKKEILAQAKLRLQEGYQIAKLKVSQLSFSDAAKLIHQLKDTFR LRIDVNRAWKTEDSLQFFSEYSLDSFDYVEEPFQNPKELSLFSHPLAVDESFPSNFSLQDLETLCSLKSLIYKPTLQGGM TTCLPVYKWAKQRNIEFVLSSSFESELGLSHLISMAARLKLTSPIGIGTYHFLPQTEGPFLISNGQVNLKNL >Mature_312_residues MKFEKFICNLRQFTLTNGLKRSIAIISLVDKKGNISKGEVAPLPPWSKETLEEAIRQIDAKKSFILNIDWTIENYRDALM HLHLFPSVQFGIESALLSFLDPLKTYSIPVSALLMGSKKEILAQAKLRLQEGYQIAKLKVSQLSFSDAAKLIHQLKDTFR LRIDVNRAWKTEDSLQFFSEYSLDSFDYVEEPFQNPKELSLFSHPLAVDESFPSNFSLQDLETLCSLKSLIYKPTLQGGM TTCLPVYKWAKQRNIEFVLSSSFESELGLSHLISMAARLKLTSPIGIGTYHFLPQTEGPFLISNGQVNLKNL
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=265, Percent_Identity=27.1698113207547, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 35417; Mature: 35417
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEKFICNLRQFTLTNGLKRSIAIISLVDKKGNISKGEVAPLPPWSKETLEEAIRQIDA CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC KKSFILNIDWTIENYRDALMHLHLFPSVQFGIESALLSFLDPLKTYSIPVSALLMGSKKE CCEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHH ILAQAKLRLQEGYQIAKLKVSQLSFSDAAKLIHQLKDTFRLRIDVNRAWKTEDSLQFFSE HHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH YSLDSFDYVEEPFQNPKELSLFSHPLAVDESFPSNFSLQDLETLCSLKSLIYKPTLQGGM CCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC TTCLPVYKWAKQRNIEFVLSSSFESELGLSHLISMAARLKLTSPIGIGTYHFLPQTEGPF HHHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHHHHHEECCCCCCCEEEECCCCCCCE LISNGQVNLKNL EEECCEEEECCC >Mature Secondary Structure MKFEKFICNLRQFTLTNGLKRSIAIISLVDKKGNISKGEVAPLPPWSKETLEEAIRQIDA CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC KKSFILNIDWTIENYRDALMHLHLFPSVQFGIESALLSFLDPLKTYSIPVSALLMGSKKE CCEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHH ILAQAKLRLQEGYQIAKLKVSQLSFSDAAKLIHQLKDTFRLRIDVNRAWKTEDSLQFFSE HHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH YSLDSFDYVEEPFQNPKELSLFSHPLAVDESFPSNFSLQDLETLCSLKSLIYKPTLQGGM CCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC TTCLPVYKWAKQRNIEFVLSSSFESELGLSHLISMAARLKLTSPIGIGTYHFLPQTEGPF HHHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHHHHHEECCCCCCCEEEECCCCCCCE LISNGQVNLKNL EEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]